C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000GI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000015649-ENSDARG00000016085 CGP 7955 14:31845042-31929097
GeneTranscriptPositionBiotype
ENSDARG00000015649 (rap2c)
RAP2C, member of RAS oncogene family
ENSDART00000014095 (rap2c-001) 31845042-31852704 protein_coding
CIL_0000GI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000123728-ENSG00000076770 CGP 9606 X:132203024-132489968
GeneTranscriptPositionBiotype
ENSG00000123728 (RAP2C)
RAP2C, member of RAS oncogene family
ENST00000342983 (RAP2C-001) 132203025-132218124 protein_coding
ENST00000370874 (RAP2C-002) 132204650-132219433 protein_coding
ENST00000460462 (RAP2C-003) 132205449-132218332 processed_transcript
ENST00000490400 (RAP2C-004) 132217666-132219443 processed_transcript
ENST00000620646 (RAP2C-201) 132203024-132219480 protein_coding
CIL_0000GI_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000050029-ENSMUSG00000036109 CGP 10090 X:51003912-51206532
GeneTranscriptPositionBiotype
ENSMUSG00000036109 (Mbnl3)
muscleblind-like 3 (Drosophila)
ENSMUST00000041495 (Mbnl3-003) 51120080-51146415 protein_coding
ENSMUST00000114875 (Mbnl3-002) 51117269-51205832 protein_coding
ENSMUST00000114876 (Mbnl3-001) 51120080-51205990 protein_coding
ENSMUST00000136404 (Mbnl3-006) 51120489-51164674 protein_coding
ENSMUST00000148116 (Mbnl3-005) 51120885-51139366 processed_transcript
ENSMUST00000150014 (Mbnl3-004) 51120452-51127370 retained_intron
ENSMUST00000156028 (Mbnl3-007) 51164417-51206532 processed_transcript
ENSMUSG00000050029 (Rap2c)
RAP2C, member of RAS oncogene family
ENSMUST00000053593 (Rap2c-001) 51003912-51018018 protein_coding
ENSMUSG00000082556 (Gm5387)
predicted gene 5387
ENSMUST00000119776 (Gm5387-001) 51043963-51044819 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000GI_0001ENSDARG00000015649ENSDART00000014095CIL_0000GI_0002ENSG00000123728ENST00000342983ENST00000370874ENST00000460462ENST00000490400ENST00000620646CIL_0000GI_0003ENSMUSG00000036109ENSMUST00000041495ENSMUST00000114875ENSMUST00000114876ENSMUST00000136404ENSMUST00000148116ENSMUST00000150014ENSMUST00000156028ENSMUSG00000050029ENSMUST00000053593ENSMUSG00000082556ENSMUST00000119776
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000GI_0001ENSDARG00000015649ENSDART00000014095CIL_0000GI_0002ENSG00000123728ENST00000342983ENST00000370874ENST00000460462ENST00000620646CIL_0000GI_0003ENSMUSG00000036109ENSMUST00000041495ENSMUST00000114875ENSMUST00000114876ENSMUST00000136404ENSMUST00000148116ENSMUST00000150014ENSMUST00000156028ENSMUSG00000050029ENSMUST00000053593ENSMUSG00000082556ENSMUST00000119776
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000015649 ENSDART00000014095 N/A N/A N/A 14.412±9.17 N/A N/A 18.304±6.93 9.543±0.85 1.410±0.00 N/A 10.121±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000123728 ENST00000342983 6.606±0.00 N/A N/A 3.097±1.80 3.477±0.00 2.441±1.17 2.391±0.00 2.974±0.93 4.044±2.09 6.227±0.00 1.688±1.07 3.404±2.62 4.488±1.78 2.424±0.17
ENST00000370874 N/A N/A 1.095±0.00 0.825±0.00 N/A N/A 0.446±0.00 N/A N/A 0.972±0.00 N/A 1.186±0.00 N/A N/A
ENST00000460462 N/A N/A N/A N/A N/A N/A N/A N/A 2.655±0.00 N/A N/A 13.525±0.00 11.792±0.00 7.617±0.00
ENST00000490400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620646 N/A 2.715±0.00 1.399±0.00 N/A N/A N/A N/A 1.995±0.73 1.472±0.00 N/A N/A 2.253±0.20 1.972±1.33 2.599±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036109 ENSMUST00000041495 0.936±0.33 0.237±0.13 N/A N/A 1.940±0.25 1.519±0.84 0.187±0.05 0.220±0.08 0.117±0.06 1.300±0.93 N/A 0.935±0.41 32.216±6.23 0.537±0.09
ENSMUST00000114875 0.529±0.08 0.190±0.12 N/A N/A 0.620±0.21 0.885±0.28 0.033±0.01 0.133±0.02 0.053±0.03 0.772±0.19 0.015±0.01 0.795±0.35 N/A 0.169±0.00
ENSMUST00000114876 0.496±0.23 0.242±0.00 N/A 0.263±0.00 0.921±0.89 1.520±0.59 N/A 0.128±0.07 0.088±0.00 1.115±0.36 N/A 0.916±0.45 8.033±0.00 1.360±0.29
ENSMUST00000136404 N/A 0.115±0.02 N/A N/A N/A N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A N/A
ENSMUST00000148116 N/A N/A N/A N/A 1.752±0.00 N/A 0.120±0.00 0.174±0.00 0.103±0.02 N/A 0.072±0.03 0.837±0.34 N/A 0.601±0.00
ENSMUST00000150014 N/A 0.060±0.00 N/A N/A 0.236±0.05 0.382±0.00 0.015±0.00 0.070±0.02 0.043±0.02 0.275±0.00 0.009±0.00 0.304±0.10 N/A N/A
ENSMUST00000156028 N/A N/A N/A N/A N/A N/A N/A N/A 0.504±0.00 N/A 0.181±0.00 N/A N/A N/A
ENSMUSG00000050029 ENSMUST00000053593 3.087±0.97 N/A 1.357±0.17 4.211±1.72 4.098±0.46 N/A 2.360±1.15 N/A 3.881±1.33 1.213±0.00 6.941±0.21 7.985±1.85 17.466±6.83 0.859±0.34
ENSMUSG00000082556 ENSMUST00000119776 N/A N/A N/A N/A N/A 0.284±0.07 N/A N/A 0.071±0.00 N/A N/A 0.026±0.00 0.043±0.00 N/A

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