C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 39
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036492 Rnf39 10090 + 17:36942918-36947986 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040498 Rnf39-001 36942918-36947986 protein_coding
  ENSMUST00000173072 Rnf39-002 36943055-36945615 protein_coding
  ENSMUST00000174669 Rnf39-003 36945078-36947286 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040498ENSMUST00000173072ENSMUST00000174669
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040498 0.354±0.10 0.321±0.24 5.027±1.65 0.984±0.72 1.712±0.40 12.347±1.98 0.290±0.06 0.186±0.04 1.413±1.44 12.744±2.13 0.180±0.11 0.703±0.30 0.323±0.23 0.145±0.06
ENSMUST00000173072 N/A 0.202±0.11 N/A 1.093±0.00 N/A N/A N/A 0.083±0.00 N/A N/A 0.119±0.05 0.926±0.00 0.125±0.00 0.386±0.13
ENSMUST00000174669 N/A 0.498±0.31 N/A 0.869±0.00 N/A N/A N/A N/A N/A N/A 0.256±0.05 0.345±0.00 1.471±0.00 0.096±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069407 zgc:194990 zgc:194990 protein_coding Danio_rerio
ENSDARG00000079703 si:dkey-18p12.4 si:dkey-18p12.4 protein_coding Danio_rerio
ENSDARG00000090930 si:ch211-120g10.1 si:ch211-120g10.1 protein_coding Danio_rerio
ENSDARG00000092931 si:ch211-114c12.5 si:ch211-114c12.5 protein_coding Danio_rerio
ENSDARG00000096739 si:ch211-222b21.3 si:ch211-222b21.3 protein_coding Danio_rerio
ENSDARG00000097100 si:ch73-364h19.2 si:ch73-364h19.2 protein_coding Danio_rerio
ENSG00000204618 RNF39 ring finger protein 39 protein_coding Homo_sapiens

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