C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 39
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040498 Rnf39-001 ENSMUSG00000036492 10090 + 17:36942918-36947986 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040498
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040498 0.354±0.10 0.321±0.24 5.027±1.65 0.984±0.72 1.712±0.40 12.347±1.98 0.290±0.06 0.186±0.04 1.413±1.44 12.744±2.13 0.180±0.11 0.703±0.30 0.323±0.23 0.145±0.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000244360 RNF39-001 protein_coding Homo_sapiens 0 959
ENST00000376750 RNF39-002 protein_coding Homo_sapiens 0 728
ENST00000376751 RNF39-002 protein_coding Homo_sapiens 0 712
ENST00000383611 RNF39-001 protein_coding Homo_sapiens 0 981
ENST00000417541 RNF39-002 protein_coding Homo_sapiens 0 706
ENST00000420562 RNF39-001 protein_coding Homo_sapiens 0 953
ENST00000425956 RNF39-001 protein_coding Homo_sapiens 0 959
ENST00000432647 RNF39-001 protein_coding Homo_sapiens 0 959
ENST00000441449 RNF39-002 protein_coding Homo_sapiens 0 712
ENST00000442063 RNF39-002 protein_coding Homo_sapiens 0 712
ENST00000442378 RNF39-002 protein_coding Homo_sapiens 0 712
ENST00000449145 RNF39-001 protein_coding Homo_sapiens 0 953
ENST00000450015 RNF39-001 protein_coding Homo_sapiens 0 959
ENST00000451425 RNF39-002 protein_coding Homo_sapiens 0 712
ENST00000456156 RNF39-001 protein_coding Homo_sapiens 0 959
ENST00000457092 RNF39-002 protein_coding Homo_sapiens 0 712

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