C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: si:ch211-120g10.1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000090930 si:ch211-120g10.1 7955 - 3:60536288-60548970 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000128042 si:ch211-120g10.1-201 60536288-60545741 protein_coding
  ENSDART00000153247 si:ch211-120g10.1-001 60536288-60548970 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000128042ENSDART00000153247
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000128042 5.083±4.34 1.196±1.05 0.110±0.00 N/A 2.137±0.00
ENSDART00000153247 0.979±0.75 0.753±0.39 N/A 0.047±0.00 0.427±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00029F CIL_00029F_0001 CGP 3:60488590-60548970

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000103313 MEFV Mediterranean fever protein_coding Homo_sapiens
ENSG00000128250 RFPL1 ret finger protein-like 1 protein_coding Homo_sapiens
ENSG00000128253 HGNC:9979 ret finger protein-like 2 protein_coding Homo_sapiens
ENSG00000128276 RFPL3 ret finger protein-like 3 protein_coding Homo_sapiens
ENSG00000204618 RNF39 ring finger protein 39 protein_coding Homo_sapiens
ENSG00000223638 RFPL4A ret finger protein-like 4A protein_coding Homo_sapiens
ENSG00000229292 RFPL4AL1 ret finger protein-like 4A-like 1 protein_coding Homo_sapiens
ENSG00000251258 RFPL4B ret finger protein-like 4B protein_coding Homo_sapiens
ENSMUSG00000022534 Mefv Mediterranean fever protein_coding Mus_musculus
ENSMUSG00000035191 Rfpl4 ret finger protein-like 4 protein_coding Mus_musculus
ENSMUSG00000036492 Rnf39 ring finger protein 39 protein_coding Mus_musculus

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