C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: delta/notch-like EGF-related receptor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036766 Dner 10090 - 1:84369839-84696221 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000049126 Dner-001 84369839-84696221 protein_coding
  ENSMUST00000185606 Dner-003 84580715-84640485 protein_coding
  ENSMUST00000191306 Dner-002 84533944-84696019 retained_intron
  ENSMUST00000191546 Dner-004 84583004-84623841 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049126ENSMUST00000185606ENSMUST00000191306
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049126 0.175±0.13 2.241±0.53 7.894±0.04 50.261±33.12 0.093±0.06 3.084±0.37 0.072±0.03 0.151±0.05 0.034±0.04 0.914±0.20 0.024±0.02 2.248±1.75 0.038±0.03 0.379±0.15
ENSMUST00000185606 N/A N/A N/A N/A N/A N/A 0.219±0.03 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191306 N/A 2.345±0.66 N/A N/A 0.012±0.00 0.710±0.00 0.031±0.01 0.131±0.00 N/A N/A N/A 1.191±0.77 N/A 0.018±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AT CIL_0004AT_0003 CGP 1:84036296-84696221
CIL_00087W CIL_00087W_0002 VISTA 1:84248810-84851347
CIL_00076T CIL_00076T_0002 CGP 1:84369839-84840516

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005112 IPI Notch binding
GO:0005509 IEA calcium ion binding
GO:0005769 IEA early endosome
GO:0005886 TAS plasma membrane
GO:0007219 IEA Notch signaling pathway
GO:0007220 IDA Notch receptor processing
GO:0007417 IEA central nervous system development
GO:0010001 IDA glial cell differentiation
GO:0016021 IEA integral component of membrane
GO:0030425 IDA dendrite
GO:0043025 IDA neuronal cell body
GO:0048741 IDA skeletal muscle fiber development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061031 dner delta/notch-like EGF repeat containing protein_coding Danio_rerio
ENSG00000187957 DNER delta/notch-like EGF repeat containing protein_coding Homo_sapiens

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