C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: delta/notch-like EGF-related receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000049126 Dner-001 ENSMUSG00000036766 10090 - 1:84369839-84696221 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049126
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049126 0.175±0.13 2.241±0.53 7.894±0.04 50.261±33.12 0.093±0.06 3.084±0.37 0.072±0.03 0.151±0.05 0.034±0.04 0.914±0.20 0.024±0.02 2.248±1.75 0.038±0.03 0.379±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AT CIL_0004AT_0003 CGP 1:84036296-84696221
CIL_00087W CIL_00087W_0002 VISTA 1:84248810-84851347
CIL_00076T CIL_00076T_0002 CGP 1:84369839-84840516

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005112 IPI Notch binding
GO:0005509 IEA calcium ion binding
GO:0005769 IEA early endosome
GO:0005886 TAS plasma membrane
GO:0007219 IEA Notch signaling pathway
GO:0007220 IDA Notch receptor processing
GO:0007417 IEA central nervous system development
GO:0010001 IDA glial cell differentiation
GO:0016021 IEA integral component of membrane
GO:0030425 IDA dendrite
GO:0043025 IDA neuronal cell body
GO:0048741 IDA skeletal muscle fiber development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341772 DNER-001 protein_coding Homo_sapiens 0 3186

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