C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif-containing 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000075141 Trim17-001 ENSMUSG00000036964 10090 + 11:58963802-58973098 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000075141
Transcript ID Testis
ENSMUST00000075141 71.426±6.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UC CIL_0000UC_000A CGP 11:58948920-58956830

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0008270 IEA zinc ion binding
GO:0016874 IEA ligase activity
GO:0051865 IEA protein autoubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295033 TRIM17-002 protein_coding Homo_sapiens 0 1053
ENST00000355586 TRIM17-009 protein_coding Homo_sapiens 0 444
ENST00000366697 TRIM17-003 protein_coding Homo_sapiens 0 1053
ENST00000366698 TRIM17-001 protein_coding Homo_sapiens 0 1053
ENST00000456946 TRIM17-006 protein_coding Homo_sapiens 0 617
ENST00000479800 TRIM17-004 protein_coding Homo_sapiens 0 580

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