C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NTF2-related export protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036992 Nxt1 10090 + 2:148672601-148676027 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047177 Nxt1-001 148672626-148676027 protein_coding
  ENSMUST00000109961 Nxt1-002 148672601-148676027 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047177ENSMUST00000109961
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047177 10.769±3.54 6.360±0.61 10.319±2.63 12.615±8.29 8.095±0.88 8.396±1.13 5.035±0.20 8.962±1.29 18.801±13.29 9.619±0.23 2.887±0.54 14.083±2.50 12.390±5.02 19.576±5.50
ENSMUST00000109961 1.911±0.24 1.356±0.27 1.764±0.00 0.398±0.00 1.103±0.25 1.422±0.32 N/A 1.098±0.13 2.458±1.55 1.027±0.05 0.315±0.03 1.993±0.51 2.124±0.90 54.809±18.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00023I CIL_00023I_0002 CGP 2:148436640-148676027
CIL_00023L CIL_00023L_0002 CGP 2:148672601-148692949

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005643 IDA nuclear pore
GO:0005737 IEA cytoplasm
GO:0006405 IDA RNA export from nucleus
GO:0006611 IDA protein export from nucleus
GO:0008536 IDA Ran GTPase binding
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061527 nxt2 nuclear transport factor 2-like export factor 2 protein_coding Danio_rerio
ENSG00000132661 NXT1 nuclear transport factor 2-like export factor 1 protein_coding Homo_sapiens

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