C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00023I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125810-ENSG00000132661 CGP 9606 20:23079349-23354777
GeneTranscriptPositionBiotype
ENSG00000125810 (CD93)
CD93 molecule
ENST00000246006 (CD93-002) 23079349-23086340 protein_coding
ENSG00000132661 (NXT1)
nuclear transport factor 2-like export factor 1
ENST00000254998 (NXT1-001) 23350736-23354777 protein_coding
ENSG00000230387 (RP4-737E23.2)
ENST00000411595 (RP4-737E23.2-001) 23187975-23190307 lincRNA
ENST00000613502 (RP4-737E23.2-002) 23187961-23190305 lincRNA
ENSG00000233746 (LINC00656)
long intergenic non-protein coding RNA 656
ENST00000443744 (LINC00656-001) 23125068-23132621 lincRNA
ENSG00000234832 (RP3-322G13.7)
ENST00000442884 (RP3-322G13.7-001) 23346941-23351486 antisense
ENSG00000275179 (RP4-737E23.7)
ENST00000622708 (RP4-737E23.7-001) 23180176-23187544 lincRNA
ENSG00000277901 (RP5-851M4.1)
ENST00000610918 (RP5-851M4.1-001) 23320958-23325352 lincRNA
ENSG00000279164 (RP4-737E23.5)
ENST00000623468 (RP4-737E23.5-001) 23148086-23149939 TEC
CIL_00023I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027435-ENSMUSG00000036992 CGP 10090 2:148436640-148676027
GeneTranscriptPositionBiotype
ENSMUSG00000027435 (Cd93)
CD93 antigen
ENSMUST00000099269 (Cd93-001) 148436640-148443563 protein_coding
ENSMUSG00000036992 (Nxt1)
NTF2-related export protein 1
ENSMUST00000047177 (Nxt1-001) 148672626-148676027 protein_coding
ENSMUST00000109961 (Nxt1-002) 148672601-148676027 protein_coding
ENSMUSG00000087678 (Gm14120)
predicted gene 14120
ENSMUST00000129067 (Gm14120-001) 148468890-148478780 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00023I_0001ENSG00000125810ENST00000246006ENSG00000132661ENST00000254998ENSG00000230387ENST00000411595ENST00000613502ENSG00000233746ENST00000443744ENSG00000234832ENST00000442884ENSG00000275179ENST00000622708ENSG00000277901ENST00000610918ENSG00000279164ENST00000623468CIL_00023I_0002ENSMUSG00000027435ENSMUST00000099269ENSMUSG00000036992ENSMUST00000047177ENSMUST00000109961ENSMUSG00000087678ENSMUST00000129067
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00023I_0001ENSG00000125810ENST00000246006ENSG00000132661ENST00000254998ENSG00000230387ENST00000411595ENST00000613502ENSG00000233746ENST00000443744ENSG00000234832ENST00000442884ENSG00000275179ENST00000622708ENSG00000277901ENST00000610918ENSG00000279164ENST00000623468CIL_00023I_0002ENSMUSG00000027435ENSMUST00000099269ENSMUSG00000036992ENSMUST00000047177ENSMUST00000109961ENSMUSG00000087678ENSMUST00000129067
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125810 ENST00000246006 75.007±0.00 28.993±0.00 1.832±0.00 2.151±1.93 18.648±10.17 15.143±12.65 9.519±5.89 7.565±6.27 5.101±1.59 51.213±32.33 3.615±0.79 6.937±2.37 67.537±21.80 8.113±7.10
ENSG00000132661 ENST00000254998 7.378±0.00 20.689±0.00 0.334±0.00 2.207±2.00 5.027±2.79 5.749±5.37 1.996±1.53 3.603±2.84 2.225±1.91 9.167±8.55 2.756±2.20 18.928±10.20 15.933±4.57 14.296±2.94
ENSG00000230387 ENST00000411595 N/A N/A N/A N/A N/A 0.079±0.00 0.028±0.00 0.561±0.00 N/A 0.570±0.00 N/A 0.149±0.00 0.198±0.10 1.149±0.08
ENST00000613502 0.104±0.00 0.069±0.00 0.309±0.00 0.041±0.00 0.145±0.00 0.037±0.03 N/A 0.021±0.00 0.131±0.00 0.021±0.00 N/A 0.102±0.06 0.031±0.01 0.618±0.37
ENSG00000233746 ENST00000443744 0.010±0.00 N/A N/A N/A N/A 0.185±0.00 N/A N/A N/A 0.058±0.04 N/A 0.018±0.01 0.224±0.10 0.259±0.00
ENSG00000234832 ENST00000442884 N/A N/A N/A N/A 0.088±0.05 N/A 0.276±0.00 N/A 0.355±0.00 0.070±0.00 N/A 0.037±0.01 N/A 0.578±0.00
ENSG00000275179 ENST00000622708 0.049±0.00 N/A N/A N/A 0.056±0.00 N/A N/A N/A N/A N/A N/A N/A 0.228±0.05 1.093±0.54
ENSG00000277901 ENST00000610918 0.153±0.00 0.128±0.00 N/A 0.091±0.00 N/A 0.040±0.00 0.077±0.00 0.391±0.00 N/A N/A N/A 0.074±0.01 0.322±0.28 0.680±0.30
ENSG00000279164 ENST00000623468 0.063±0.00 0.016±0.00 N/A N/A 0.049±0.00 N/A 0.022±0.00 0.045±0.04 N/A 0.108±0.00 0.647±0.62 0.047±0.02 N/A 0.019±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027435 ENSMUST00000099269 24.763±1.66 8.877±0.99 5.259±0.90 1.874±1.09 14.859±2.99 3.439±0.58 14.832±0.85 4.955±0.28 1.368±0.61 63.209±11.02 4.651±0.79 11.174±2.71 4.476±2.85 0.352±0.16
ENSMUSG00000036992 ENSMUST00000047177 10.769±3.54 6.360±0.61 10.319±2.63 12.615±8.29 8.095±0.88 8.396±1.13 5.035±0.20 8.962±1.29 18.801±13.29 9.619±0.23 2.887±0.54 14.083±2.50 12.390±5.02 19.576±5.50
ENSMUST00000109961 1.911±0.24 1.356±0.27 1.764±0.00 0.398±0.00 1.103±0.25 1.422±0.32 N/A 1.098±0.13 2.458±1.55 1.027±0.05 0.315±0.03 1.993±0.51 2.124±0.90 54.809±18.43
ENSMUSG00000087678 ENSMUST00000129067 0.049±0.01 N/A N/A 0.017±0.01 N/A N/A 0.015±0.00 N/A 0.003±0.00 N/A N/A 0.006±0.00 0.017±0.02 0.012±0.00

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