C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NTF2-related export protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047177 Nxt1-001 ENSMUSG00000036992 10090 + 2:148672626-148676027 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047177
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047177 10.769±3.54 6.360±0.61 10.319±2.63 12.615±8.29 8.095±0.88 8.396±1.13 5.035±0.20 8.962±1.29 18.801±13.29 9.619±0.23 2.887±0.54 14.083±2.50 12.390±5.02 19.576±5.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00023I CIL_00023I_0002 CGP 2:148436640-148676027
CIL_00023L CIL_00023L_0002 CGP 2:148672601-148692949

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005643 IDA nuclear pore
GO:0005737 IEA cytoplasm
GO:0006405 IDA RNA export from nucleus
GO:0006611 IDA protein export from nucleus
GO:0008536 IDA Ran GTPase binding
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254998 NXT1-001 protein_coding Homo_sapiens 0 682
ENST00000458481 NXT1P1-001 processed_pseudogene Homo_sapiens 0 392

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