C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: antigenic determinant of rec-A protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037262 Kin 10090 + 2:10080593-10092806 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000042512 Kin-001 10080624-10092806 protein_coding
  ENSMUST00000142599 Kin-002 10080593-10091819 processed_transcript
  ENSMUST00000142773 Kin-003 10090297-10092179 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042512ENSMUST00000142599ENSMUST00000142773
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042512 1.342±0.19 0.533±0.22 6.725±0.12 5.695±0.90 1.058±0.43 0.913±0.03 1.108±0.35 1.119±0.24 6.453±2.09 0.994±0.13 2.243±0.51 4.202±5.20 15.169±10.52 2.560±3.65
ENSMUST00000142599 2.505±0.46 1.690±0.25 N/A 2.196±0.00 2.148±0.32 0.698±0.24 1.357±0.07 1.841±0.63 N/A 0.665±0.00 N/A 3.009±0.87 N/A 0.692±0.26
ENSMUST00000142773 N/A 1.493±0.39 N/A 10.956±0.00 0.878±0.12 0.715±0.05 0.615±0.00 1.074±0.00 3.483±1.74 N/A N/A 14.233±12.86 35.806±11.76 4.194±3.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PV CIL_0000PV_0002 CGP 2:10056016-10092806
CIL_0002F8 CIL_0002F8_0002 CGP 2:10080593-10131396

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003690 IDA double-stranded DNA binding
GO:0003723 ISS RNA binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006260 IDA DNA replication
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0006397 IEA mRNA processing
GO:0006974 IEP cellular response to DNA damage stimulus
GO:0016363 ISS nuclear matrix
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045515 kin KIN, antigenic determinant of recA protein homolog (mouse) protein_coding Danio_rerio
ENSG00000151657 KIN Kin17 DNA and RNA binding protein protein_coding Homo_sapiens

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