C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000PV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000045514-ENSDARG00000045515 CGP 7955 4:24260432-24275293
GeneTranscriptPositionBiotype
ENSDARG00000045514 (atp5c1)
ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 		ENSDART00000066930 (atp5c1-001) 24260432-24268685 protein_coding
ENSDARG00000045515 (kin)
KIN, antigenic determinant of recA protein homolog (mouse) 		ENSDART00000078529 (kin-201) 24268705-24275235 protein_coding
ENSDART00000136643 (kin-001) 24268705-24275293 protein_coding
ENSDARG00000045516 (itih2)
inter-alpha (globulin) inhibitor H2 		ENSDART00000066932 (itih2-001) 24275045-24303101 protein_coding
ENSDART00000066933 (itih2-002) 24275045-24303101 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0000PV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025781-ENSMUSG00000037262 CGP 10090 2:10056016-10092806
GeneTranscriptPositionBiotype
ENSMUSG00000025781 (Atp5c1)
ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 		ENSMUST00000026887 (Atp5c1-002) 10056016-10080427 protein_coding
ENSMUST00000114896 (Atp5c1-003) 10056030-10080444 protein_coding
ENSMUST00000114897 (Atp5c1-001) 10056030-10080510 protein_coding
ENSMUST00000130067 (Atp5c1-006) 10064159-10080055 protein_coding
ENSMUST00000139810 (Atp5c1-004) 10063481-10080176 protein_coding
ENSMUST00000145530 (Atp5c1-005) 10063286-10080322 protein_coding
ENSMUST00000153554 (Atp5c1-007) 10063337-10079859 protein_coding
ENSMUSG00000037262 (Kin)
antigenic determinant of rec-A protein 		ENSMUST00000042512 (Kin-001) 10080624-10092806 protein_coding
ENSMUST00000142599 (Kin-002) 10080593-10091819 processed_transcript
ENSMUST00000142773 (Kin-003) 10090297-10092179 processed_transcript
ENSMUSG00000077733 (Gm23608)
predicted gene, 23608 		ENSMUST00000104545 (Gm23608-201) 10075653-10075780 snoRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

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Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000PV_0001ENSDARG00000045514ENSDART00000066930ENSDARG00000045515ENSDART00000078529ENSDART00000136643ENSDARG00000045516ENSDART00000066932ENSDART00000066933CIL_0000PV_0002ENSMUSG00000025781ENSMUST00000026887ENSMUST00000114896ENSMUST00000114897ENSMUST00000130067ENSMUST00000139810ENSMUST00000145530ENSMUST00000153554ENSMUSG00000037262ENSMUST00000042512ENSMUST00000142599ENSMUST00000142773ENSMUSG00000077733ENSMUST00000104545
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000PV_0001ENSDARG00000045514ENSDART00000066930ENSDARG00000045515ENSDART00000078529ENSDART00000136643ENSDARG00000045516ENSDART00000066932ENSDART00000066933CIL_0000PV_0002ENSMUSG00000025781ENSMUST00000026887ENSMUST00000114897ENSMUST00000139810ENSMUSG00000037262ENSMUST00000042512ENSMUST00000142599ENSMUST00000142773ENSMUSG00000077733ENSMUST00000104545
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000045514 ENSDART00000066930 N/A N/A N/A 94.037±91.87 N/A N/A 553.959±412.99 76.029±96.19 34.732±0.00 N/A 321.954±0.00 N/A N/A N/A
ENSDARG00000045515 ENSDART00000078529 N/A N/A N/A 3.260±0.93 N/A N/A 3.712±0.00 N/A N/A N/A 1.647±0.00 N/A N/A N/A
ENSDART00000136643 N/A N/A N/A N/A N/A N/A 2.083±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000045516 ENSDART00000066932 N/A N/A N/A 0.173±0.00 N/A N/A 8.294±0.29 216.324±41.00 N/A N/A N/A N/A N/A N/A
ENSDART00000066933 N/A N/A N/A N/A N/A N/A 2.845±2.54 117.464±0.00 78.781±0.00 N/A 3.283±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025781 ENSMUST00000026887 108.063±6.02 103.266±17.83 66.973±4.48 41.798±0.00 290.645±121.68 178.185±14.61 742.361±140.46 239.767±43.02 121.904±33.71 83.783±7.29 483.881±16.85 136.443±64.71 30.802±9.63 35.916±12.60
ENSMUST00000114896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000114897 144.710±39.51 75.117±12.95 87.484±8.96 99.381±47.69 75.028±19.74 62.543±9.73 N/A 259.438±57.90 144.224±52.43 33.356±1.61 N/A 136.745±76.74 134.107±72.94 48.304±19.20
ENSMUST00000130067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139810 N/A N/A N/A 270.698±0.00 N/A N/A N/A N/A N/A N/A N/A 371.152±0.00 308.628±145.40 145.351±0.00
ENSMUST00000145530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037262 ENSMUST00000042512 1.342±0.19 0.533±0.22 6.725±0.12 5.695±0.90 1.058±0.43 0.913±0.03 1.108±0.35 1.119±0.24 6.453±2.09 0.994±0.13 2.243±0.51 4.202±5.20 15.169±10.52 2.560±3.65
ENSMUST00000142599 2.505±0.46 1.690±0.25 N/A 2.196±0.00 2.148±0.32 0.698±0.24 1.357±0.07 1.841±0.63 N/A 0.665±0.00 N/A 3.009±0.87 N/A 0.692±0.26
ENSMUST00000142773 N/A 1.493±0.39 N/A 10.956±0.00 0.878±0.12 0.715±0.05 0.615±0.00 1.074±0.00 3.483±1.74 N/A N/A 14.233±12.86 35.806±11.76 4.194±3.87
ENSMUSG00000077733 ENSMUST00000104545 N/A N/A N/A 8.284±0.00 N/A N/A N/A N/A 8.203±1.61 N/A N/A 21.990±3.37 12.094±0.00 N/A

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