C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TRAF3 interacting protein 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037318 Traf3ip3 10090 - 1:193175506-193201703 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000043550 Traf3ip3-001 193175506-193201546 protein_coding
  ENSMUST00000159666 Traf3ip3-012 193184663-193187140 processed_transcript
  ENSMUST00000159805 Traf3ip3-002 193194359-193201513 retained_intron
  ENSMUST00000160302 Traf3ip3-006 193179237-193184818 processed_transcript
  ENSMUST00000160332 Traf3ip3-004 193179241-193197821 retained_intron
  ENSMUST00000160397 Traf3ip3-008 193179237-193184525 processed_transcript
  ENSMUST00000161145 Traf3ip3-009 193198030-193201489 processed_transcript
  ENSMUST00000161151 Traf3ip3-007 193198126-193201502 processed_transcript
  ENSMUST00000161367 Traf3ip3-010 193194529-193197971 processed_transcript
  ENSMUST00000161403 Traf3ip3-003 193185190-193201455 retained_intron
  ENSMUST00000162480 Traf3ip3-011 193184574-193187172 retained_intron
  ENSMUST00000162905 Traf3ip3-005 193200896-193201703 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartLiverMuscleENSMUST00000043550ENSMUST00000159805ENSMUST00000161403
Transcript ID Adipose Adrenal Brain Breast Heart Liver Muscle
ENSMUST00000043550 0.418±0.01 0.309±0.00 0.605±0.00 4.970±0.48 0.567±0.00 3.350±1.70 1.001±0.79
ENSMUST00000159805 N/A 0.460±0.13 N/A 9.485±1.10 N/A N/A N/A
ENSMUST00000161403 N/A 0.207±0.02 N/A 2.968±0.88 0.286±0.08 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZL CIL_0007ZL_0002 VISTA 1:192841048-193441723
CIL_00089N CIL_00089N_0002 VISTA 1:193149329-193750185

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086708 CR847543.1 Uncharacterized protein protein_coding Danio_rerio
ENSG00000009790 TRAF3IP3 TRAF3 interacting protein 3 protein_coding Homo_sapiens

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