C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 6430571L13 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037977 6430571L13Rik 10090 + 9:107340602-107352422 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000042581 6430571L13Rik-001 107340602-107349683 protein_coding
  ENSMUST00000135520 6430571L13Rik-002 107348130-107352422 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042581ENSMUST00000135520
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042581 0.389±0.13 0.218±0.10 0.733±0.18 2.314±0.31 2.167±1.46 0.116±0.05 1.334±0.12 2.177±0.34 0.233±0.21 0.258±0.09 16.408±0.56 0.311±0.13 1.302±1.04 N/A
ENSMUST00000135520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.631±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D8 CIL_0008D8_0002 VISTA 9:107005935-107609958

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078609 C6H3orf18 (1 of 2) chromosome 3 open reading frame 18 protein_coding Danio_rerio
ENSDARG00000097079 C6H3orf18 (2 of 2) chromosome 3 open reading frame 18 protein_coding Danio_rerio
ENSG00000088543 C3orf18 chromosome 3 open reading frame 18 protein_coding Homo_sapiens

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