C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: centlein, centrosomal protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038070 Cntln 10090 + 4:84884309-85131921 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047023 Cntln-001 84884309-85131921 protein_coding
  ENSMUST00000102819 Cntln-003 84884404-84958508 protein_coding
  ENSMUST00000107190 Cntln-002 85098104-85131918 protein_coding
  ENSMUST00000169371 Cntln-201 84884465-85131917 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047023ENSMUST00000102819ENSMUST00000107190ENSMUST00000169371
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047023 0.945±0.46 N/A 1.357±0.09 2.216±0.55 0.612±0.35 0.168±0.08 0.196±0.09 0.361±0.20 0.498±0.32 1.141±0.19 0.196±0.08 1.812±1.86 1.160±0.59 3.199±0.54
ENSMUST00000102819 N/A 2.160±0.62 N/A N/A 0.637±0.00 0.725±0.33 N/A N/A 0.077±0.00 1.081±0.00 N/A 2.486±0.69 N/A N/A
ENSMUST00000107190 2.233±0.70 2.118±0.19 1.174±0.32 2.017±0.60 1.189±0.21 0.309±0.05 0.516±0.23 0.807±0.26 0.417±0.20 1.674±0.27 0.201±0.05 2.877±1.04 0.412±0.00 1.867±0.19
ENSMUST00000169371 N/A N/A 0.430±0.04 0.501±0.12 N/A N/A 0.199±0.00 N/A 0.161±0.05 N/A 0.176±0.07 1.705±0.72 0.364±0.20 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PP CIL_0007PP_0002 UCNEbase 4:83661885-85119123
CIL_000148 CIL_000148_0002 CGP 4:84275095-85131921
CIL_0008E9 CIL_0008E9_0002 VISTA 4:84686009-85288497
CIL_0007VQ CIL_0007VQ_0002 VISTA 4:84695828-85296432
CIL_00013X CIL_00013X_0002 CGP 4:84884309-85639195

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005814 IEA centriole
GO:0005856 IEA cytoskeleton
GO:0010457 IEA centriole-centriole cohesion
GO:0019901 IEA protein kinase binding
GO:0019904 IEA protein domain specific binding
GO:0030674 IEA protein binding, bridging
GO:0033365 IEA protein localization to organelle
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000033345 cntln centlein, centrosomal protein protein_coding Danio_rerio
ENSG00000044459 CNTLN centlein, centrosomal protein protein_coding Homo_sapiens

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