C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008E9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs529 VISTA 9606 9:17022202-17624373
GeneTranscriptPositionBiotype
ENSG00000044459 (CNTLN)
centlein, centrosomal protein 		ENST00000380641 (CNTLN-004) 17135040-17302051 protein_coding
ENST00000380647 (CNTLN-001) 17134982-17503923 protein_coding
ENST00000461247 (CNTLN-002) 17415818-17462984 processed_transcript
ENST00000484374 (CNTLN-003) 17134982-17168556 processed_transcript
ENSG00000107295 (SH3GL2)
SH3-domain GRB2-like 2 		ENST00000380607 (SH3GL2-001) 17579123-17797129 protein_coding
ENST00000467085 (SH3GL2-002) 17579082-17630429 processed_transcript
ENSG00000224488 (SAMM50P1)
SAMM50 sorting and assembly machinery component pseudogene 1 		ENST00000455403 (SAMM50P1-001) 17447145-17448543 processed_pseudogene
ENSG00000228810 (PABPC1P11)
poly(A) binding protein, cytoplasmic 1 pseudogene 11 		ENST00000428966 (PABPC1P11-001) 17589161-17591318 processed_pseudogene
ENSG00000237083 (RP11-132E11.4)
 ENST00000435405 (RP11-132E11.4-001) 17108304-17108604 processed_pseudogene
ENSG00000237153 (RP11-132E11.2)
 ENST00000430545 (RP11-132E11.2-001) 17048919-17112815 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0008E9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs529 VISTA 10090 4:84686009-85288497
GeneTranscriptPositionBiotype
ENSMUSG00000028488 (Sh3gl2)
SH3-domain GRB2-like 2 		ENSMUST00000030212 (Sh3gl2-001) 85205441-85389380 protein_coding
ENSMUST00000107184 (Sh3gl2-004) 85205535-85377691 protein_coding
ENSMUST00000107188 (Sh3gl2-002) 85205126-85399529 protein_coding
ENSMUST00000107189 (Sh3gl2-003) 85205469-85639195 protein_coding
ENSMUST00000133109 (Sh3gl2-005) 85376341-85387604 protein_coding
ENSMUSG00000038070 (Cntln)
centlein, centrosomal protein 		ENSMUST00000047023 (Cntln-001) 84884309-85131921 protein_coding
ENSMUST00000102819 (Cntln-003) 84884404-84958508 protein_coding
ENSMUST00000107190 (Cntln-002) 85098104-85131918 protein_coding
ENSMUST00000169371 (Cntln-201) 84884465-85131917 protein_coding
ENSMUSG00000080303 (Gm12419)
predicted gene 12419 		ENSMUST00000116649 (Gm12419-001) 84923554-84924189 processed_pseudogene
ENSMUSG00000081775 (Gm12420)
predicted gene 12420 		ENSMUST00000119869 (Gm12420-001) 84697863-84698910 processed_pseudogene
ENSMUSG00000081862 (Gm12413)
predicted gene 12413 		ENSMUST00000121508 (Gm12413-001) 85245451-85245762 processed_pseudogene
ENSMUSG00000083139 (Gm12418)
predicted gene 12418 		ENSMUST00000118116 (Gm12418-001) 84915896-84916837 processed_pseudogene
ENSMUSG00000086413 (Gm12415)
predicted gene 12415 		ENSMUST00000141637 (Gm12415-001) 84741475-84742291 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008E9_0001ENSG00000044459ENST00000380641ENST00000380647ENST00000461247ENST00000484374ENSG00000107295ENST00000380607ENST00000467085ENSG00000224488ENST00000455403ENSG00000228810ENST00000428966ENSG00000237083ENST00000435405ENSG00000237153ENST00000430545CIL_0008E9_0002ENSMUSG00000028488ENSMUST00000030212ENSMUST00000107184ENSMUST00000107188ENSMUST00000107189ENSMUST00000133109ENSMUSG00000038070ENSMUST00000047023ENSMUST00000102819ENSMUST00000107190ENSMUST00000169371ENSMUSG00000080303ENSMUST00000116649ENSMUSG00000081775ENSMUST00000119869ENSMUSG00000081862ENSMUST00000121508ENSMUSG00000083139ENSMUST00000118116ENSMUSG00000086413ENSMUST00000141637
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008E9_0001ENSG00000044459ENST00000380641ENST00000380647ENST00000484374ENSG00000107295ENST00000380607ENSG00000224488ENST00000455403ENSG00000228810ENST00000428966ENSG00000237083ENST00000435405ENSG00000237153ENST00000430545CIL_0008E9_0002ENSMUSG00000028488ENSMUST00000030212ENSMUST00000107184ENSMUST00000107188ENSMUST00000107189ENSMUST00000133109ENSMUSG00000038070ENSMUST00000047023ENSMUST00000102819ENSMUST00000107190ENSMUST00000169371ENSMUSG00000080303ENSMUST00000116649ENSMUSG00000081775ENSMUST00000119869ENSMUSG00000081862ENSMUST00000121508ENSMUSG00000083139ENSMUST00000118116ENSMUSG00000086413ENSMUST00000141637
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000044459 ENST00000380641 0.895±0.00 1.255±0.00 1.493±0.00 0.415±0.15 0.963±0.35 0.566±0.28 0.346±0.02 1.682±1.25 1.027±0.44 0.875±0.56 0.181±0.01 0.628±0.33 0.516±0.21 1.792±0.78
ENST00000380647 0.971±0.00 N/A 0.206±0.00 0.330±0.08 0.945±0.36 1.182±0.80 0.520±0.00 N/A 0.523±0.04 1.042±0.71 N/A 1.815±0.51 0.584±0.49 1.487±0.78
ENST00000461247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484374 0.520±0.00 N/A N/A N/A N/A N/A N/A 0.445±0.00 0.409±0.00 0.229±0.00 N/A N/A N/A 0.744±0.00
ENSG00000107295 ENST00000380607 N/A 0.040±0.00 1.470±0.00 51.864±16.02 0.198±0.08 0.195±0.09 1.390±0.95 5.186±0.00 0.009±0.00 0.637±0.06 N/A 0.352±0.34 0.162±0.08 3.852±0.25
ENST00000467085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224488 ENST00000455403 N/A N/A 0.037±0.00 N/A N/A N/A 0.131±0.00 N/A 0.034±0.00 0.021±0.00 N/A 0.088±0.00 N/A N/A
ENSG00000228810 ENST00000428966 N/A 0.022±0.00 0.088±0.00 0.238±0.13 N/A 0.078±0.07 0.058±0.00 0.027±0.00 0.055±0.04 0.135±0.00 N/A 0.033±0.02 N/A 0.019±0.00
ENSG00000237083 ENST00000435405 N/A N/A N/A N/A N/A N/A 0.169±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000237153 ENST00000430545 N/A N/A 0.900±0.00 0.089±0.00 N/A N/A N/A 0.094±0.00 N/A N/A N/A N/A N/A 0.110±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028488 ENSMUST00000030212 1.910±1.85 5.710±2.01 61.432±4.75 17.280±4.16 0.256±0.16 6.558±1.98 0.288±0.05 5.532±0.68 0.039±0.03 1.486±0.23 0.049±0.02 3.177±1.03 0.162±0.19 5.122±2.42
ENSMUST00000107184 N/A N/A N/A N/A N/A N/A N/A N/A 0.037±0.00 N/A N/A N/A 0.052±0.00 6.284±0.00
ENSMUST00000107188 N/A N/A N/A N/A N/A 1.207±0.00 N/A N/A N/A N/A N/A 0.670±0.00 N/A N/A
ENSMUST00000107189 0.012±0.00 N/A N/A N/A N/A N/A N/A N/A 0.008±0.00 N/A N/A N/A N/A N/A
ENSMUST00000133109 N/A N/A N/A 141.820±0.00 N/A N/A N/A N/A 0.063±0.00 N/A 0.052±0.03 4.810±0.00 0.045±0.00 3.953±0.00
ENSMUSG00000038070 ENSMUST00000047023 0.945±0.46 N/A 1.357±0.09 2.216±0.55 0.612±0.35 0.168±0.08 0.196±0.09 0.361±0.20 0.498±0.32 1.141±0.19 0.196±0.08 1.812±1.86 1.160±0.59 3.199±0.54
ENSMUST00000102819 N/A 2.160±0.62 N/A N/A 0.637±0.00 0.725±0.33 N/A N/A 0.077±0.00 1.081±0.00 N/A 2.486±0.69 N/A N/A
ENSMUST00000107190 2.233±0.70 2.118±0.19 1.174±0.32 2.017±0.60 1.189±0.21 0.309±0.05 0.516±0.23 0.807±0.26 0.417±0.20 1.674±0.27 0.201±0.05 2.877±1.04 0.412±0.00 1.867±0.19
ENSMUST00000169371 N/A N/A 0.430±0.04 0.501±0.12 N/A N/A 0.199±0.00 N/A 0.161±0.05 N/A 0.176±0.07 1.705±0.72 0.364±0.20 N/A
ENSMUSG00000080303 ENSMUST00000116649 0.114±0.05 N/A 0.103±0.00 0.531±0.45 0.192±0.00 0.220±0.01 0.159±0.00 0.056±0.00 0.050±0.04 0.068±0.00 0.206±0.05 0.166±0.08 0.108±0.02 0.175±0.03
ENSMUSG00000081775 ENSMUST00000119869 N/A N/A 0.032±0.00 N/A N/A 0.062±0.00 N/A N/A 0.026±0.00 0.035±0.00 N/A N/A N/A 0.016±0.00
ENSMUSG00000081862 ENSMUST00000121508 0.281±0.00 N/A 0.486±0.00 0.084±0.02 N/A 0.497±0.00 N/A 0.246±0.02 N/A N/A N/A N/A N/A 0.599±0.24
ENSMUSG00000083139 ENSMUST00000118116 0.296±0.13 0.143±0.00 0.082±0.01 0.109±0.04 0.278±0.25 0.215±0.12 0.112±0.08 0.087±0.04 0.084±0.03 0.108±0.04 N/A 0.416±0.29 0.084±0.04 0.167±0.09
ENSMUSG00000086413 ENSMUST00000141637 N/A N/A N/A N/A 0.255±0.08 N/A N/A N/A N/A N/A N/A N/A N/A N/A

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