C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: potassium voltage-gated channel, shaker-related, subfamily, member 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038077 Kcna6 10090 - 6:126708329-126740674 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040751 Kcna6-001 126708329-126740662 nonsense_mediated_decay
  ENSMUST00000112242 Kcna6-003 126736688-126740151 protein_coding
  ENSMUST00000128137 Kcna6-002 126708331-126736811 processed_transcript
  ENSMUST00000185333 Kcna6-201 126708332-126740674 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040751ENSMUST00000112242ENSMUST00000128137ENSMUST00000185333
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040751 0.037±0.01 0.048±0.02 0.637±0.05 1.354±0.50 0.093±0.01 0.072±0.01 0.107±0.05 0.048±0.02 0.007±0.00 N/A 0.036±0.01 0.023±0.01 0.073±0.02 0.024±0.01
ENSMUST00000112242 N/A 0.077±0.02 N/A 5.681±0.00 0.161±0.00 0.169±0.05 0.104±0.00 0.050±0.02 0.015±0.01 0.076±0.02 0.064±0.02 0.076±0.01 0.061±0.07 N/A
ENSMUST00000128137 0.164±0.03 0.184±0.07 1.080±0.07 2.964±1.44 0.427±0.16 0.330±0.08 0.235±0.00 0.115±0.03 0.040±0.02 0.237±0.07 0.092±0.04 0.198±0.14 0.063±0.03 0.115±0.07
ENSMUST00000185333 0.034±0.01 0.029±0.00 N/A 0.502±0.00 0.078±0.00 0.070±0.01 0.051±0.00 0.046±0.01 0.005±0.00 N/A 0.034±0.01 0.021±0.01 N/A 0.021±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005251 IBA delayed rectifier potassium channel activity
GO:0008076 IEA voltage-gated potassium channel complex
GO:0034765 IEA regulation of ion transmembrane transport
GO:0051260 IEA protein homooligomerization
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000151079 KCNA6 potassium voltage-gated channel, shaker-related subfamily, member 6 protein_coding Homo_sapiens

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