C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, shaker-related, subfamily, member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040751 Kcna6-001 ENSMUSG00000038077 10090 - 6:126708329-126740662 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000040751
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000040751 0.037±0.01 0.048±0.02 0.637±0.05 1.354±0.50 0.093±0.01 0.072±0.01 0.107±0.05 0.048±0.02 0.007±0.00 0.036±0.01 0.023±0.01 0.073±0.02 0.024±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005251 IBA delayed rectifier potassium channel activity
GO:0008076 IEA voltage-gated potassium channel complex
GO:0034765 IEA regulation of ion transmembrane transport
GO:0051260 IEA protein homooligomerization
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000121427 kcna2b-201 protein_coding Danio_rerio 0 303
ENSDART00000027398 KCNA2 (1 of 2)-201 protein_coding Danio_rerio 0 276
ENSDART00000131038 protein_coding Danio_rerio 0 213
ENSDART00000109628 KCNA3 (2 of 2)-201 protein_coding Danio_rerio 3e-40 172
ENSDART00000009653 KCNA1A-201 protein_coding Danio_rerio 5e-18 99
ENST00000252321 KCNA5-001 protein_coding Homo_sapiens 0 575
ENST00000280684 KCNA6-001 protein_coding Homo_sapiens 0 2030
ENST00000369769 KCNA3-001 protein_coding Homo_sapiens 0 292
ENST00000382545 KCNA1-001 protein_coding Homo_sapiens 0 303
ENST00000433855 GALNT8-201 protein_coding Homo_sapiens 0 2030

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