C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, shaker-related, subfamily, member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112242 Kcna6-003 ENSMUSG00000038077 10090 - 6:126736688-126740151 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000112242
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000112242 0.077±0.02 5.681±0.00 0.161±0.00 0.169±0.05 0.104±0.00 0.050±0.02 0.015±0.01 0.076±0.02 0.064±0.02 0.076±0.01 0.061±0.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005251 IBA delayed rectifier potassium channel activity
GO:0008076 IEA voltage-gated potassium channel complex
GO:0034765 IEA regulation of ion transmembrane transport
GO:0051260 IEA protein homooligomerization
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000121427 kcna2b-201 protein_coding Danio_rerio 0 303
ENSDART00000027398 KCNA2 (1 of 2)-201 protein_coding Danio_rerio 0 276
ENSDART00000131038 protein_coding Danio_rerio 0 213
ENSDART00000109628 KCNA3 (2 of 2)-201 protein_coding Danio_rerio 2e-40 172
ENSDART00000009653 KCNA1A-201 protein_coding Danio_rerio 3e-18 99
ENST00000252321 KCNA5-001 protein_coding Homo_sapiens 0 575
ENST00000280684 KCNA6-001 protein_coding Homo_sapiens 0 2030
ENST00000369769 KCNA3-001 protein_coding Homo_sapiens 0 292
ENST00000382545 KCNA1-001 protein_coding Homo_sapiens 0 303
ENST00000433855 GALNT8-201 protein_coding Homo_sapiens 0 2030

Loading