C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trafficking protein particle complex 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000039061 Trappc11-001 ENSMUSG00000038102 10090 - 8:47490115-47533467 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039061
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039061 10.507±3.13 7.567±2.32 11.503±1.41 11.317±2.45 8.617±2.38 8.976±1.65 5.809±0.61 11.563±2.32 7.784±1.75 10.848±1.87 5.718±0.54 9.632±2.48 11.750±2.74 6.946±2.46

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005794 IEA Golgi apparatus
GO:0008150 ND biological_process
GO:0016192 IEA vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334690 TRAPPC11-001 protein_coding Homo_sapiens 0 4002
ENST00000357207 TRAPPC11-201 protein_coding Homo_sapiens 0 3688
ENST00000504526 TRAPPC11-006 processed_transcript Homo_sapiens 0 305
ENST00000505676 TRAPPC11-003 nonsense_mediated_decay Homo_sapiens 0 1362
ENST00000509857 TRAPPC11-009 retained_intron Homo_sapiens 0 656
ENST00000511409 TRAPPC11-008 processed_transcript Homo_sapiens 0 230
ENST00000512476 TRAPPC11-004 protein_coding Homo_sapiens 0 2405
ENST00000513600 TRAPPC11-007 retained_intron Homo_sapiens 0 501

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