C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: claudin 16
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038148 Cldn16 10090 + 16:26463135-26482765 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000115302 Cldn16-002 26463256-26482763 protein_coding
  ENSMUST00000161053 Cldn16-001 26463135-26482765 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainKidneyOvaryENSMUST00000115302ENSMUST00000161053
Transcript ID Adipose Brain Kidney Ovary
ENSMUST00000115302 N/A 0.009±0.00 2.877±0.91 N/A
ENSMUST00000161053 0.035±0.00 N/A 5.508±1.23 0.189±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DN CIL_0000DN_0002 CGP 16:26356642-26482765
CIL_0000DO CIL_0000DO_0002 CGP 16:26463135-26526771

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0005923 ISS tight junction
GO:0006811 IEA ion transport
GO:0016021 IEA integral component of membrane
GO:0016338 ISS calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules
GO:0042802 ISS identical protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000113946 CLDN16 claudin 16 protein_coding Homo_sapiens

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