C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: claudin 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115302 Cldn16-002 ENSMUSG00000038148 10090 + 16:26463256-26482763 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyENSMUST00000115302
Transcript ID Brain Kidney
ENSMUST00000115302 0.009±0.00 2.877±0.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DN CIL_0000DN_0002 CGP 16:26356642-26482765
CIL_0000DO CIL_0000DO_0002 CGP 16:26463135-26526771

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005886 IEA plasma membrane
GO:0005923 ISS tight junction
GO:0006811 IEA ion transport
GO:0016021 IEA integral component of membrane
GO:0016338 ISS calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules
GO:0042802 ISS identical protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264734 CLDN16-001 protein_coding Homo_sapiens 0 769
ENST00000468220 CLDN16-003 processed_transcript Homo_sapiens 0 285

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