C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: spondin 1, (f-spondin) extracellular matrix protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038156 Spon1 10090 + 7:113765998-114043370 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046687 Spon1-001 113765998-114043370 protein_coding
  ENSMUST00000084696 Spon1-002 113766174-113929876 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046687ENSMUST00000084696
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046687 19.033±11.20 6.310±1.91 9.313±6.09 6.248±1.72 15.687±4.00 3.351±0.97 3.891±0.69 11.609±0.80 0.222±0.14 55.665±0.89 0.692±0.16 23.859±11.55 1.493±0.70 2.055±0.53
ENSMUST00000084696 N/A N/A N/A N/A 3.164±0.00 N/A N/A N/A 0.083±0.03 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003PM CIL_0003PM_0002 CGP 7:113765998-114117781

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IEA extracellular space
GO:0007155 IEA cell adhesion
GO:0031012 IEA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010029 spon1a spondin 1a protein_coding Danio_rerio
ENSG00000262655 SPON1 spondin 1, extracellular matrix protein protein_coding Homo_sapiens

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