C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spondin 1, (f-spondin) extracellular matrix protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000046687 Spon1-001 ENSMUSG00000038156 10090 + 7:113765998-114043370 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046687
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046687 19.033±11.20 6.310±1.91 9.313±6.09 6.248±1.72 15.687±4.00 3.351±0.97 3.891±0.69 11.609±0.80 0.222±0.14 55.665±0.89 0.692±0.16 23.859±11.55 1.493±0.70 2.055±0.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003PM CIL_0003PM_0002 CGP 7:113765998-114117781

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IEA extracellular space
GO:0007155 IEA cell adhesion
GO:0031012 IEA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000576479 SPON1-001 protein_coding Homo_sapiens 0 3155
ENST00000591785 SPON1-002 retained_intron Homo_sapiens 0 586

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