C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hippocampus abundant transcript-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038212 Hiatl1 10090 - 13:65064663-65112982 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000054730 Hiatl1-201 65065051-65112982 protein_coding
  ENSMUST00000148779 Hiatl1-004 65066576-65069827 retained_intron
  ENSMUST00000155487 Hiatl1-001 65064663-65112975 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000054730ENSMUST00000148779ENSMUST00000155487
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054730 2.852±0.25 N/A 6.962±0.14 3.277±0.28 4.919±2.87 7.255±0.00 1.673±0.60 2.971±0.63 5.675±3.04 3.720±0.49 2.373±0.22 5.851±3.26 13.256±6.20 0.709±0.36
ENSMUST00000148779 N/A N/A N/A 6.300±0.00 N/A N/A N/A N/A N/A N/A N/A 7.047±0.00 N/A N/A
ENSMUST00000155487 10.555±2.76 43.299±3.14 N/A 1.656±0.43 14.773±9.02 24.586±9.55 3.092±0.74 8.525±3.55 6.110±2.37 21.096±8.11 0.236±0.00 19.043±6.27 N/A 1.761±0.35

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005575 ND cellular_component
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010023 CU856539.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000030129 si:ch211-87m7.2 si:ch211-87m7.2 protein_coding Danio_rerio
ENSG00000196312 HIATL2 hippocampus abundant transcript-like 2 protein_coding Homo_sapiens

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