C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hippocampus abundant transcript-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155487 Hiatl1-001 ENSMUSG00000038212 10090 - 13:65064663-65112975 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000155487
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000155487 10.555±2.76 43.299±3.14 1.656±0.43 14.773±9.02 24.586±9.55 3.092±0.74 8.525±3.55 6.110±2.37 21.096±8.11 0.236±0.00 19.043±6.27 1.761±0.35

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005575 ND cellular_component
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000375223 HIATL2-201 protein_coding Homo_sapiens 0 494
ENST00000375344 HIATL1-001 protein_coding Homo_sapiens 0 1949
ENST00000428393 HIATL1-201 protein_coding Homo_sapiens 0 1018
ENST00000533726 RP11-334E6.2-001 processed_pseudogene Homo_sapiens 0 929
ENST00000602917 HIATL2-001 protein_coding Homo_sapiens 0 494

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