C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hippocampus abundant transcript-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000054730 Hiatl1-201 ENSMUSG00000038212 10090 - 13:65065051-65112982 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000054730
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054730 2.852±0.25 6.962±0.14 3.277±0.28 4.919±2.87 7.255±0.00 1.673±0.60 2.971±0.63 5.675±3.04 3.720±0.49 2.373±0.22 5.851±3.26 13.256±6.20 0.709±0.36

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005575 ND cellular_component
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000375223 HIATL2-201 protein_coding Homo_sapiens 0 425
ENST00000375344 HIATL1-001 protein_coding Homo_sapiens 0 1869
ENST00000428393 HIATL1-201 protein_coding Homo_sapiens 0 1018
ENST00000533726 RP11-334E6.2-001 processed_pseudogene Homo_sapiens 0 929
ENST00000602917 HIATL2-001 protein_coding Homo_sapiens 0 425

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