C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038274 Fau 10090 + 19:6057888-6059524 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000043074 Fau-201 6057888-6059524 protein_coding
  ENSMUST00000178310 Fau-202 6057888-6059524 protein_coding
  ENSMUST00000179142 Fau-203 6057967-6059524 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043074ENSMUST00000178310ENSMUST00000179142
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043074 181.758±36.02 475.317±82.28 679.228±54.75 322.351±140.67 416.185±203.53 701.037±88.73 89.728±43.43 303.684±21.35 569.189±270.70 367.166±89.44 129.997±19.70 425.822±128.46 415.431±116.70 255.295±61.88
ENSMUST00000178310 26.611±5.40 56.910±8.11 131.949±42.61 45.355±10.81 56.003±30.10 91.183±10.52 16.088±4.62 48.747±4.48 48.088±20.28 33.092±0.00 21.492±4.65 51.961±13.17 61.742±17.32 39.865±0.00
ENSMUST00000179142 N/A N/A N/A 13.413±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 45.457±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0002 VISTA 19:5510095-6112698
CIL_0001YU CIL_0001YU_0002 CGP 19:6053630-6059524

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014830 faua Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a protein_coding Danio_rerio
ENSDARG00000043663 faub Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b protein_coding Danio_rerio
ENSG00000149806 FAU Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed protein_coding Homo_sapiens

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