C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lactation elevated 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038302 Lace1 10090 - 10:42312585-42478565 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041024 Lace1-001 42312585-42478565 protein_coding
  ENSMUST00000133326 Lace1-003 42312588-42478415 nonsense_mediated_decay
  ENSMUST00000149832 Lace1-004 42313582-42425308 nonsense_mediated_decay
  ENSMUST00000151747 Lace1-002 42312585-42478280 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041024ENSMUST00000133326ENSMUST00000151747
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041024 3.914±0.68 8.285±1.47 2.005±0.22 1.753±1.29 4.511±0.75 4.084±1.42 4.486±0.77 4.617±0.66 1.269±0.43 2.559±0.51 4.271±0.55 3.205±1.37 3.898±1.14 0.410±0.19
ENSMUST00000133326 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.458±0.00 N/A N/A N/A N/A
ENSMUST00000151747 2.512±0.46 N/A 2.844±0.23 0.319±0.00 5.025±2.52 N/A 9.031±0.90 5.921±1.72 1.240±0.52 1.082±0.00 1.052±0.12 2.167±0.25 1.588±0.92 0.497±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YH CIL_0008YH_0002 VISTA 10:41950904-42552282

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011466 lace1a lactation elevated 1a protein_coding Danio_rerio
ENSG00000135537 LACE1 lactation elevated 1 protein_coding Homo_sapiens

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