C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ER degradation enhancer, mannosidase alpha-like 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038312 Edem2 10090 - 2:155701677-155729475 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040833 Edem2-001 155701677-155729475 protein_coding
  ENSMUST00000131350 Edem2-004 155708535-155710986 retained_intron
  ENSMUST00000139868 Edem2-002 155708980-155716359 retained_intron
  ENSMUST00000148571 Edem2-003 155705718-155713318 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040833ENSMUST00000148571
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040833 15.723±3.92 100.018±6.69 20.838±4.10 8.828±4.93 18.270±11.49 44.748±20.85 4.201±1.35 22.870±6.05 27.234±11.30 28.602±10.30 1.795±0.50 49.203±30.56 57.894±23.73 11.471±4.51
ENSMUST00000148571 N/A N/A 13.750±0.00 13.517±0.00 4.345±0.00 N/A 1.605±0.09 N/A N/A N/A N/A 3.515±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EI CIL_0008EI_0002 VISTA 2:155562263-156164147
CIL_0006AB CIL_0006AB_0002 CGP 2:155634271-155729475

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004571 IEA mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509 IEA calcium ion binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028448 edem2 ER degradation enhancer, mannosidase alpha-like 2 protein_coding Danio_rerio
ENSG00000088298 EDEM2 ER degradation enhancer, mannosidase alpha-like 2 protein_coding Homo_sapiens

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