C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1700003F12 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038523 1700003F12Rik 10090 + 2:154547085-154550003 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000045116 1700003F12Rik-001 154548888-154550003 protein_coding
  ENSMUST00000109709 1700003F12Rik-002 154548927-154550003 protein_coding
  ENSMUST00000135641 1700003F12Rik-003 154547085-154549818 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045116ENSMUST00000109709ENSMUST00000135641
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045116 0.785±0.10 0.790±0.08 0.282±0.00 1.551±0.46 0.254±0.13 0.301±0.13 0.305±0.03 1.435±1.61 0.728±0.15 N/A 0.776±0.00 0.137±0.06 586.132±254.84
ENSMUST00000109709 N/A 0.959±0.15 N/A N/A 0.152±0.02 0.243±0.00 0.272±0.00 0.033±0.00 N/A 0.134±0.00 0.809±0.24 0.075±0.00 16.693±0.00
ENSMUST00000135641 N/A 0.570±0.01 N/A N/A 0.158±0.08 N/A N/A 0.166±0.10 N/A N/A N/A 0.069±0.00 9.778±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051Z CIL_00051Z_0002 CGP 2:154436481-154558890
CIL_000520 CIL_000520_0002 CGP 2:154544399-154558890
CIL_00051X CIL_00051X_0002 CGP 2:154547085-154553276

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000149609 C20orf144 chromosome 20 open reading frame 144 protein_coding Homo_sapiens

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