C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubinuclein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038538 Ubn2 10090 + 6:38433950-38524825 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000039127 Ubn2-002 38434173-38502579 protein_coding
  ENSMUST00000159215 Ubn2-009 38483245-38488344 processed_transcript
  ENSMUST00000159447 Ubn2-004 38491004-38524825 protein_coding
  ENSMUST00000159925 Ubn2-006 38484093-38502579 retained_intron
  ENSMUST00000160583 Ubn2-001 38433950-38512763 protein_coding
  ENSMUST00000161280 Ubn2-005 38463741-38484854 retained_intron
  ENSMUST00000162026 Ubn2-007 38462803-38463582 retained_intron
  ENSMUST00000162423 Ubn2-008 38483147-38487460 retained_intron
  ENSMUST00000162593 Ubn2-003 38440533-38524791 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039127ENSMUST00000159447ENSMUST00000159925ENSMUST00000160583ENSMUST00000162593
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039127 N/A N/A N/A N/A 3.389±0.00 N/A N/A 1.452±0.09 N/A N/A N/A 2.325±0.00 N/A 7.458±1.88
ENSMUST00000159447 N/A 1.721±0.00 N/A 4.927±0.24 N/A N/A N/A N/A N/A N/A N/A 3.044±0.05 N/A N/A
ENSMUST00000159925 N/A N/A N/A N/A 1.757±0.00 1.798±0.00 N/A N/A 0.853±0.00 N/A N/A 3.014±0.09 N/A N/A
ENSMUST00000160583 2.729±1.01 1.956±0.19 3.724±0.61 4.749±2.66 2.515±1.00 1.655±0.57 1.244±0.30 1.048±0.35 2.528±1.36 2.692±0.59 1.313±0.39 4.474±0.83 1.936±0.75 N/A
ENSMUST00000162593 N/A N/A N/A 1.859±0.83 N/A N/A 0.593±0.00 N/A N/A N/A N/A 3.047±0.82 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002QC CIL_0002QC_0002 CGP 6:38381469-38524825
CIL_0002QB CIL_0002QB_0002 CGP 6:38433950-38539449

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005615 IEA extracellular space
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052315 UBN2 (1 of 2) ubinuclein 2 protein_coding Danio_rerio
ENSDARG00000063062 ubn2 ubinuclein 2 protein_coding Danio_rerio
ENSG00000157741 UBN2 ubinuclein 2 protein_coding Homo_sapiens

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