C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002QB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000157741-ENSG00000164898 CGP 9606 7:139230356-139346319
GeneTranscriptPositionBiotype
ENSG00000146963 (C7orf55-LUC7L2)
C7orf55-LUC7L2 readthrough 		ENST00000263545 (C7orf55-LUC7L2-201) 139371412-139423457 protein_coding
ENST00000354926 (C7orf55-LUC7L2-001) 139359908-139423452 protein_coding
ENST00000435096 (C7orf55-LUC7L2-008) 139359908-139374555 retained_intron
ENST00000456182 (C7orf55-LUC7L2-003) 139359912-139423151 nonsense_mediated_decay
ENST00000463912 (C7orf55-LUC7L2-004) 139374673-139412825 retained_intron
ENST00000482860 (C7orf55-LUC7L2-007) 139416125-139423156 processed_transcript
ENST00000498518 (C7orf55-LUC7L2-006) 139375204-139423201 retained_intron
ENST00000541170 (C7orf55-LUC7L2-005) 139340359-139422511 protein_coding
ENST00000608368 (C7orf55-LUC7L2-009) 139359512-139398624 nonsense_mediated_decay
ENST00000619796 (C7orf55-LUC7L2-202) 139359846-139423457 protein_coding
ENSG00000157741 (UBN2)
ubinuclein 2 		ENST00000473989 (UBN2-001) 139231485-139308236 protein_coding
ENST00000483726 (UBN2-002) 139258519-139277714 protein_coding
ENST00000486663 (UBN2-003) 139230356-139261290 protein_coding
ENST00000609762 (UBN2-004) 139293627-139301994 retained_intron
ENSG00000269955 (LUC7L2)
LUC7-like 2 (S. cerevisiae) 		ENST00000541515 (LUC7L2-001) 139341360-139422599 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0002QB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038538-ENSMUSG00000019689 CGP 10090 6:38433950-38539449
GeneTranscriptPositionBiotype
ENSMUSG00000019689 (1110001J03Rik)
RIKEN cDNA 1110001J03 gene 		ENSMUST00000019833 (1110001J03Rik-001) 38534823-38539449 protein_coding
ENSMUST00000147651 (1110001J03Rik-002) 38533502-38539448 processed_transcript
ENSMUSG00000038538 (Ubn2)
ubinuclein 2 		ENSMUST00000039127 (Ubn2-002) 38434173-38502579 protein_coding
ENSMUST00000159215 (Ubn2-009) 38483245-38488344 processed_transcript
ENSMUST00000159447 (Ubn2-004) 38491004-38524825 protein_coding
ENSMUST00000159925 (Ubn2-006) 38484093-38502579 retained_intron
ENSMUST00000160583 (Ubn2-001) 38433950-38512763 protein_coding
ENSMUST00000161280 (Ubn2-005) 38463741-38484854 retained_intron
ENSMUST00000162026 (Ubn2-007) 38462803-38463582 retained_intron
ENSMUST00000162423 (Ubn2-008) 38483147-38487460 retained_intron
ENSMUST00000162593 (Ubn2-003) 38440533-38524791 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002QB_0001ENSG00000146963ENST00000263545ENST00000354926ENST00000435096ENST00000456182ENST00000463912ENST00000482860ENST00000498518ENST00000541170ENST00000608368ENST00000619796ENSG00000157741ENST00000473989ENST00000483726ENST00000486663ENST00000609762ENSG00000269955ENST00000541515CIL_0002QB_0002ENSMUSG00000019689ENSMUST00000019833ENSMUST00000147651ENSMUSG00000038538ENSMUST00000039127ENSMUST00000159215ENSMUST00000159447ENSMUST00000159925ENSMUST00000160583ENSMUST00000161280ENSMUST00000162026ENSMUST00000162423ENSMUST00000162593
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002QB_0001ENSG00000146963ENST00000263545ENST00000354926ENST00000435096ENST00000456182ENST00000463912ENST00000482860ENST00000498518ENST00000541170ENSG00000157741ENST00000473989ENST00000483726ENST00000609762ENSG00000269955ENST00000541515CIL_0002QB_0002ENSMUSG00000019689ENSMUST00000019833ENSMUST00000147651ENSMUSG00000038538ENSMUST00000039127ENSMUST00000159447ENSMUST00000159925ENSMUST00000160583ENSMUST00000162593
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000146963 ENST00000263545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.316±2.82 N/A N/A
ENST00000354926 6.081±0.00 11.944±0.00 N/A 8.449±4.63 5.404±3.19 18.252±0.00 3.715±2.42 13.817±0.00 5.518±0.00 6.914±4.80 7.197±0.00 13.121±5.29 9.044±2.92 18.734±0.00
ENST00000435096 N/A N/A N/A N/A N/A N/A N/A 24.229±0.00 N/A N/A N/A N/A N/A N/A
ENST00000456182 15.198±0.00 16.303±0.00 N/A 11.519±0.00 8.384±0.00 9.070±0.00 5.691±0.00 N/A 5.207±0.00 10.463±0.00 10.064±0.00 26.961±6.66 12.482±8.41 27.923±6.67
ENST00000463912 N/A N/A N/A N/A N/A N/A N/A N/A 3.118±0.00 N/A N/A N/A N/A N/A
ENST00000482860 N/A N/A N/A N/A N/A N/A 1.284±0.00 2.399±0.00 N/A N/A 1.681±0.00 N/A N/A N/A
ENST00000498518 N/A 5.209±0.00 N/A 2.822±0.00 3.800±0.00 3.060±0.00 N/A N/A N/A 5.149±0.00 N/A N/A N/A N/A
ENST00000541170 N/A N/A N/A N/A N/A 3.342±0.00 N/A N/A N/A N/A N/A N/A N/A 15.927±0.00
ENST00000608368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000157741 ENST00000473989 1.127±0.00 0.556±0.00 1.626±0.00 1.154±0.00 0.865±0.04 0.676±0.03 0.975±0.29 0.966±0.00 1.147±0.71 1.026±0.15 1.898±1.06 1.646±0.61 0.547±0.17 4.289±0.55
ENST00000483726 N/A N/A N/A N/A 1.423±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609762 N/A N/A N/A N/A N/A 1.015±0.00 N/A N/A N/A 1.454±0.00 N/A N/A N/A N/A
ENSG00000269955 ENST00000541515 12.484±0.00 14.696±0.00 6.463±0.00 12.607±4.17 8.136±4.42 14.378±0.00 8.181±5.12 12.498±8.65 5.208±0.00 5.911±1.84 7.404±4.09 22.995±1.95 11.825±4.46 18.424±1.76
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000019689 ENSMUST00000019833 79.853±9.55 281.247±33.24 48.188±3.76 33.200±11.51 112.176±45.17 145.716±22.80 169.305±38.05 234.406±9.73 80.913±31.01 68.521±7.75 71.318±7.15 132.436±53.48 16.880±7.44 21.704±10.43
ENSMUST00000147651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.380±1.98
ENSMUSG00000038538 ENSMUST00000039127 N/A N/A N/A N/A 3.389±0.00 N/A N/A 1.452±0.09 N/A N/A N/A 2.325±0.00 N/A 7.458±1.88
ENSMUST00000159215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159447 N/A 1.721±0.00 N/A 4.927±0.24 N/A N/A N/A N/A N/A N/A N/A 3.044±0.05 N/A N/A
ENSMUST00000159925 N/A N/A N/A N/A 1.757±0.00 1.798±0.00 N/A N/A 0.853±0.00 N/A N/A 3.014±0.09 N/A N/A
ENSMUST00000160583 2.729±1.01 1.956±0.19 3.724±0.61 4.749±2.66 2.515±1.00 1.655±0.57 1.244±0.30 1.048±0.35 2.528±1.36 2.692±0.59 1.313±0.39 4.474±0.83 1.936±0.75 N/A
ENSMUST00000161280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162593 N/A N/A N/A 1.859±0.83 N/A N/A 0.593±0.00 N/A N/A N/A N/A 3.047±0.82 N/A N/A

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