C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002QC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000105948-ENSG00000157741 CGP 9606 7:139133744-139308236
GeneTranscriptPositionBiotype
ENSG00000105948 (TTC26)
tetratricopeptide repeat domain 26 		ENST00000343187 (TTC26-002) 139133783-139189800 protein_coding
ENST00000430935 (TTC26-201) 139133744-139191985 protein_coding
ENST00000464848 (TTC26-001) 139133778-139191986 protein_coding
ENST00000468866 (TTC26-009) 139133822-139148248 processed_transcript
ENST00000474035 (TTC26-006) 139133778-139161343 protein_coding
ENST00000476296 (TTC26-003) 139133788-139190292 nonsense_mediated_decay
ENST00000478836 (TTC26-005) 139133778-139189802 protein_coding
ENST00000479132 (TTC26-008) 139133776-139147154 processed_transcript
ENST00000481482 (TTC26-007) 139133780-139168581 processed_transcript
ENST00000495038 (TTC26-004) 139133764-139189665 protein_coding
ENSG00000157741 (UBN2)
ubinuclein 2 		ENST00000473989 (UBN2-001) 139231485-139308236 protein_coding
ENST00000483726 (UBN2-002) 139258519-139277714 protein_coding
ENST00000486663 (UBN2-003) 139230356-139261290 protein_coding
ENST00000609762 (UBN2-004) 139293627-139301994 retained_intron
ENSG00000228360 (RP11-365F18.1)
 ENST00000451614 (RP11-365F18.1-001) 139227537-139227828 processed_pseudogene
ENSG00000239254 (RP11-365F18.3)
 ENST00000489759 (RP11-365F18.3-001) 139172516-139174266 processed_pseudogene
ENSG00000271404 (MZT1P2)
mitotic spindle organizing protein 1 pseudogene 2 		ENST00000604387 (MZT1P2-001) 139228221-139228605 processed_pseudogene
ENSG00000271537 (RP11-365F18.6)
 ENST00000604318 (RP11-365F18.6-001) 139198557-139199142 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0002QC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000056832-ENSMUSG00000038538 CGP 10090 6:38381469-38524825
GeneTranscriptPositionBiotype
ENSMUSG00000038538 (Ubn2)
ubinuclein 2 		ENSMUST00000039127 (Ubn2-002) 38434173-38502579 protein_coding
ENSMUST00000159215 (Ubn2-009) 38483245-38488344 processed_transcript
ENSMUST00000159447 (Ubn2-004) 38491004-38524825 protein_coding
ENSMUST00000159925 (Ubn2-006) 38484093-38502579 retained_intron
ENSMUST00000160583 (Ubn2-001) 38433950-38512763 protein_coding
ENSMUST00000161280 (Ubn2-005) 38463741-38484854 retained_intron
ENSMUST00000162026 (Ubn2-007) 38462803-38463582 retained_intron
ENSMUST00000162423 (Ubn2-008) 38483147-38487460 retained_intron
ENSMUST00000162593 (Ubn2-003) 38440533-38524791 protein_coding
ENSMUSG00000056832 (Ttc26)
tetratricopeptide repeat domain 26 		ENSMUST00000159145 (Ttc26-002) 38381525-38427647 nonsense_mediated_decay
ENSMUST00000160215 (Ttc26-003) 38381529-38398324 nonsense_mediated_decay
ENSMUST00000161751 (Ttc26-004) 38381525-38395142 protein_coding
ENSMUST00000162486 (Ttc26-005) 38391507-38395480 retained_intron
ENSMUST00000162554 (Ttc26-001) 38381469-38427647 protein_coding
ENSMUSG00000089905 (Gm16563)
predicted gene 16563 		ENSMUST00000162673 (Gm16563-001) 38396267-38396689 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002QC_0001ENSG00000105948ENST00000343187ENST00000430935ENST00000464848ENST00000468866ENST00000474035ENST00000476296ENST00000478836ENST00000479132ENST00000481482ENST00000495038ENSG00000157741ENST00000473989ENST00000483726ENST00000486663ENST00000609762ENSG00000228360ENST00000451614ENSG00000239254ENST00000489759ENSG00000271404ENST00000604387ENSG00000271537ENST00000604318CIL_0002QC_0002ENSMUSG00000038538ENSMUST00000039127ENSMUST00000159215ENSMUST00000159447ENSMUST00000159925ENSMUST00000160583ENSMUST00000161280ENSMUST00000162026ENSMUST00000162423ENSMUST00000162593ENSMUSG00000056832ENSMUST00000159145ENSMUST00000160215ENSMUST00000161751ENSMUST00000162486ENSMUST00000162554ENSMUSG00000089905ENSMUST00000162673
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002QC_0001ENSG00000105948ENST00000343187ENST00000430935ENST00000464848ENST00000468866ENST00000481482ENST00000495038ENSG00000157741ENST00000473989ENST00000483726ENST00000609762ENSG00000228360ENST00000451614ENSG00000239254ENST00000489759ENSG00000271404ENST00000604387ENSG00000271537ENST00000604318CIL_0002QC_0002ENSMUSG00000038538ENSMUST00000039127ENSMUST00000159447ENSMUST00000159925ENSMUST00000160583ENSMUST00000162593ENSMUSG00000056832ENSMUST00000159145ENSMUST00000160215ENSMUST00000161751ENSMUST00000162486ENSMUST00000162554ENSMUSG00000089905ENSMUST00000162673
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105948 ENST00000343187 N/A N/A N/A 0.367±0.00 N/A N/A N/A 0.441±0.00 N/A N/A N/A 1.056±0.00 N/A 3.549±0.00
ENST00000430935 N/A N/A 0.354±0.00 N/A N/A N/A 0.152±0.00 0.094±0.00 0.413±0.00 N/A 0.087±0.00 N/A N/A N/A
ENST00000464848 0.383±0.00 0.569±0.00 N/A 0.418±0.00 0.790±0.00 0.566±0.00 0.178±0.00 0.652±0.00 N/A N/A N/A 1.182±0.41 0.715±0.15 2.732±0.58
ENST00000468866 N/A N/A N/A N/A N/A N/A N/A N/A 0.198±0.00 2.727±0.00 1.020±0.00 N/A N/A N/A
ENST00000474035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478836 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481482 N/A N/A N/A 0.464±0.00 N/A N/A N/A N/A N/A 1.017±0.00 N/A N/A N/A N/A
ENST00000495038 0.319±0.00 N/A N/A N/A N/A N/A 0.417±0.00 N/A N/A 0.877±0.00 N/A N/A N/A 2.875±0.00
ENSG00000157741 ENST00000473989 1.127±0.00 0.556±0.00 1.626±0.00 1.154±0.00 0.865±0.04 0.676±0.03 0.975±0.29 0.966±0.00 1.147±0.71 1.026±0.15 1.898±1.06 1.646±0.61 0.547±0.17 4.289±0.55
ENST00000483726 N/A N/A N/A N/A 1.423±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609762 N/A N/A N/A N/A N/A 1.015±0.00 N/A N/A N/A 1.454±0.00 N/A N/A N/A N/A
ENSG00000228360 ENST00000451614 0.584±0.00 0.185±0.00 N/A 0.190±0.00 0.312±0.00 0.173±0.00 0.219±0.00 0.124±0.00 0.054±0.00 N/A 1.051±0.00 0.200±0.11 N/A 2.699±0.77
ENSG00000239254 ENST00000489759 N/A 0.314±0.00 N/A 0.118±0.00 N/A N/A N/A 0.195±0.00 N/A 0.113±0.00 0.013±0.00 0.055±0.00 N/A 0.137±0.00
ENSG00000271404 ENST00000604387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.048±0.00
ENSG00000271537 ENST00000604318 0.156±0.00 0.558±0.00 N/A 0.198±0.00 0.292±0.23 N/A 0.054±0.00 0.448±0.00 0.570±0.00 N/A N/A 0.655±0.66 N/A 0.134±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038538 ENSMUST00000039127 N/A N/A N/A N/A 3.389±0.00 N/A N/A 1.452±0.09 N/A N/A N/A 2.325±0.00 N/A 7.458±1.88
ENSMUST00000159215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159447 N/A 1.721±0.00 N/A 4.927±0.24 N/A N/A N/A N/A N/A N/A N/A 3.044±0.05 N/A N/A
ENSMUST00000159925 N/A N/A N/A N/A 1.757±0.00 1.798±0.00 N/A N/A 0.853±0.00 N/A N/A 3.014±0.09 N/A N/A
ENSMUST00000160583 2.729±1.01 1.956±0.19 3.724±0.61 4.749±2.66 2.515±1.00 1.655±0.57 1.244±0.30 1.048±0.35 2.528±1.36 2.692±0.59 1.313±0.39 4.474±0.83 1.936±0.75 N/A
ENSMUST00000161280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162593 N/A N/A N/A 1.859±0.83 N/A N/A 0.593±0.00 N/A N/A N/A N/A 3.047±0.82 N/A N/A
ENSMUSG00000056832 ENSMUST00000159145 N/A N/A N/A 0.160±0.00 N/A 0.161±0.00 N/A 0.205±0.00 N/A 0.138±0.00 N/A N/A N/A N/A
ENSMUST00000160215 N/A 0.229±0.00 N/A N/A N/A 0.472±0.00 N/A N/A N/A N/A N/A 0.918±0.00 N/A N/A
ENSMUST00000161751 N/A N/A N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A 0.377±0.00 N/A N/A 6.268±0.00
ENSMUST00000162486 N/A 0.626±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162554 0.701±0.20 0.225±0.04 1.378±0.16 2.562±1.68 N/A 0.307±0.00 N/A 0.735±0.35 0.137±0.08 0.927±0.33 0.261±0.06 1.644±0.72 0.392±0.14 4.690±2.36
ENSMUSG00000089905 ENSMUST00000162673 N/A N/A 0.029±0.00 0.090±0.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.136±0.04

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