C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PCI domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038542 Pcid2 10090 - 8:13077189-13105459 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000164416 Pcid2-001 13077189-13105459 protein_coding
  ENSMUST00000165097 Pcid2-005 13079724-13086683 processed_transcript
  ENSMUST00000166881 Pcid2-006 13079896-13104831 processed_transcript
  ENSMUST00000167198 Pcid2-007 13085325-13098607 nonsense_mediated_decay
  ENSMUST00000168164 Pcid2-002 13077189-13105459 nonsense_mediated_decay
  ENSMUST00000172443 Pcid2-004 13085374-13104821 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000164416ENSMUST00000166881ENSMUST00000167198ENSMUST00000168164
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000164416 7.678±3.22 12.577±2.29 11.523±0.70 12.883±8.99 8.661±2.54 6.121±2.26 4.048±1.44 6.858±1.84 9.783±1.83 8.363±2.25 3.408±0.56 10.564±6.88 5.101±3.77 21.248±10.29
ENSMUST00000166881 N/A N/A N/A 8.427±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.971±0.69 11.767±0.00 N/A
ENSMUST00000168164 N/A 5.054±2.54 N/A 1.111±0.00 6.024±0.61 N/A N/A 1.316±0.06 1.963±0.00 3.183±0.00 0.908±0.00 3.686±0.82 N/A 3.826±2.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00058J CIL_00058J_0003 CGP 8:13060908-13105459
CIL_0005GG CIL_0005GG_0002 CGP 8:13077189-13147940

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0043066 IMP negative regulation of apoptotic process
GO:0043488 ISS regulation of mRNA stability
GO:0045579 IMP positive regulation of B cell differentiation
GO:0045893 IMP positive regulation of transcription, DNA-templated
GO:0048536 IMP spleen development
GO:0090267 IMP positive regulation of mitotic cell cycle spindle assembly checkpoint
GO:2000117 IEA negative regulation of cysteine-type endopeptidase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013802 pcid2 PCI domain containing 2 protein_coding Danio_rerio
ENSG00000126226 PCID2 PCI domain containing 2 protein_coding Homo_sapiens

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