C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PCI domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168164 Pcid2-002 ENSMUSG00000038542 10090 - 8:13077189-13105459 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastKidneyLiverLungMuscleOvaryTestisENSMUST00000168164
Transcript ID Adrenal Brain Breast Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000168164 5.054±2.54 1.111±0.00 6.024±0.61 1.316±0.06 1.963±0.00 3.183±0.00 0.908±0.00 3.686±0.82 3.826±2.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00058J CIL_00058J_0003 CGP 8:13060908-13105459
CIL_0005GG CIL_0005GG_0002 CGP 8:13077189-13147940

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000018741 pcid2-001 protein_coding Danio_rerio 0 699
ENST00000246505 PCID2-003 protein_coding Homo_sapiens 0 996
ENST00000337344 PCID2-002 protein_coding Homo_sapiens 0 996
ENST00000375457 PCID2-005 protein_coding Homo_sapiens 0 996
ENST00000375459 PCID2-009 protein_coding Homo_sapiens 0 996
ENST00000375477 PCID2-007 protein_coding Homo_sapiens 0 996
ENST00000375479 PCID2-001 protein_coding Homo_sapiens 0 996
ENST00000473462 PCID2-015 processed_transcript Homo_sapiens 0 712
ENST00000475433 PCID2-006 processed_transcript Homo_sapiens 0 202
ENST00000480971 PCID2-014 processed_transcript Homo_sapiens 0.00000000000006 82
ENST00000484641 PCID2-020 processed_transcript Homo_sapiens 0 529
ENST00000491548 PCID2-008 processed_transcript Homo_sapiens 0 202
ENST00000493650 PCID2-010 processed_transcript Homo_sapiens 0 795
ENST00000622406 PCID2-201 protein_coding Homo_sapiens 0 996

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