C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PCI domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164416 Pcid2-001 ENSMUSG00000038542 10090 - 8:13077189-13105459 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000164416
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000164416 7.678±3.22 12.577±2.29 11.523±0.70 12.883±8.99 8.661±2.54 6.121±2.26 4.048±1.44 6.858±1.84 9.783±1.83 8.363±2.25 3.408±0.56 10.564±6.88 5.101±3.77 21.248±10.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00058J CIL_00058J_0003 CGP 8:13060908-13105459
CIL_0005GG CIL_0005GG_0002 CGP 8:13077189-13147940

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0043066 IMP negative regulation of apoptotic process
GO:0043488 ISS regulation of mRNA stability
GO:0045579 IMP positive regulation of B cell differentiation
GO:0045893 IMP positive regulation of transcription, DNA-templated
GO:0048536 IMP spleen development
GO:0090267 IMP positive regulation of mitotic cell cycle spindle assembly checkpoint
GO:2000117 IEA negative regulation of cysteine-type endopeptidase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000018741 pcid2-001 protein_coding Danio_rerio 0 856
ENST00000246505 PCID2-003 protein_coding Homo_sapiens 0 1044
ENST00000337344 PCID2-002 protein_coding Homo_sapiens 0 1369
ENST00000375457 PCID2-005 protein_coding Homo_sapiens 0 1315
ENST00000375459 PCID2-009 protein_coding Homo_sapiens 0 1315
ENST00000375477 PCID2-007 protein_coding Homo_sapiens 0 1369
ENST00000375479 PCID2-001 protein_coding Homo_sapiens 0 1369
ENST00000462853 PCID2-012 processed_transcript Homo_sapiens 0 303
ENST00000473462 PCID2-015 processed_transcript Homo_sapiens 0 712
ENST00000475433 PCID2-006 processed_transcript Homo_sapiens 0 566
ENST00000480971 PCID2-014 processed_transcript Homo_sapiens 0 455
ENST00000484641 PCID2-020 processed_transcript Homo_sapiens 0 887
ENST00000491548 PCID2-008 processed_transcript Homo_sapiens 0 575
ENST00000493650 PCID2-010 processed_transcript Homo_sapiens 0 795
ENST00000622406 PCID2-201 protein_coding Homo_sapiens 0 1044

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