C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 35, member F1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038602 Slc35f1 10090 + 10:52690533-53111622 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000105473 Slc35f1-001 52690533-53111622 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000105473
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000105473 0.210±0.01 0.444±0.19 0.934±0.03 14.474±5.31 0.259±0.08 0.641±0.20 0.369±0.06 1.061±0.22 0.037±0.03 0.132±0.08 0.182±0.05 0.683±0.25 0.034±0.01 0.053±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005XP CIL_0005XP_0002 CGP 10:52417547-53111622
CIL_0007YT CIL_0007YT_0002 VISTA 10:52441812-53045154
CIL_0005XE CIL_0005XE_0002 CGP 10:52690533-53379851

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0006810 IEA transport
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053003 slc35f1 solute carrier family 35, member F1 protein_coding Danio_rerio
ENSG00000196376 SLC35F1 solute carrier family 35, member F1 protein_coding Homo_sapiens

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