C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005XE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000196376-ENSG00000111860 CGP 9606 6:117907526-118710075
GeneTranscriptPositionBiotype
ENSG00000169075 (BRD7P3)
bromodomain containing 7 pseudogene 3 		ENST00000469424 (BRD7P3-001) 118501430-118502906 processed_pseudogene
ENSG00000196376 (SLC35F1)
solute carrier family 35, member F1 		ENST00000360388 (SLC35F1-001) 117907526-118317676 protein_coding
ENST00000621341 (SLC35F1-201) 118154442-118317676 protein_coding
ENSG00000198523 (PLN)
phospholamban 		ENST00000357525 (PLN-001) 118548298-118560730 protein_coding
ENSG00000216809 (RP11-57K17.1)
 ENST00000407450 (RP11-57K17.1-001) 118452469-118454992 processed_pseudogene
ENSG00000217330 (SSXP10)
SSX family pseudogene 10 		ENST00000402595 (SSXP10-001) 118589070-118589634 processed_pseudogene
ENSG00000230202 (RP11-632C17__A.1)
 ENST00000443998 (RP11-632C17__A.1-001) 117998975-117999448 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0005XE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038602-ENSMUSG00000038594 CGP 10090 10:52690533-53379851
GeneTranscriptPositionBiotype
ENSMUSG00000038583 (Pln)
phospholamban 		ENSMUST00000046221 (Pln-201) 53337686-53345999 protein_coding
ENSMUST00000163319 (Pln-202) 53337686-53345999 protein_coding
ENSMUSG00000038594 (Cep85l)
centrosomal protein 85-like 		ENSMUST00000095691 (Cep85l-201) 53278081-53379851 protein_coding
ENSMUSG00000038602 (Slc35f1)
solute carrier family 35, member F1 		ENSMUST00000105473 (Slc35f1-001) 52690533-53111622 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005XE_0001ENSG00000169075ENST00000469424ENSG00000196376ENST00000360388ENST00000621341ENSG00000198523ENST00000357525ENSG00000216809ENST00000407450ENSG00000217330ENST00000402595ENSG00000230202ENST00000443998CIL_0005XE_0002ENSMUSG00000038583ENSMUST00000046221ENSMUST00000163319ENSMUSG00000038594ENSMUST00000095691ENSMUSG00000038602ENSMUST00000105473
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005XE_0001ENSG00000169075ENST00000469424ENSG00000196376ENST00000360388ENST00000621341ENSG00000198523ENST00000357525ENSG00000216809ENST00000407450ENSG00000217330ENST00000402595ENSG00000230202ENST00000443998CIL_0005XE_0002ENSMUSG00000038583ENSMUST00000046221ENSMUST00000163319ENSMUSG00000038594ENSMUST00000095691ENSMUSG00000038602ENSMUST00000105473
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000169075 ENST00000469424 0.098±0.00 0.032±0.00 0.021±0.00 0.060±0.02 0.272±0.00 0.095±0.00 0.068±0.03 0.022±0.00 0.310±0.00 0.242±0.13 0.007±0.00 0.028±0.01 N/A 0.249±0.07
ENSG00000196376 ENST00000360388 0.670±0.00 N/A N/A 5.768±3.60 N/A 0.681±0.59 N/A N/A N/A 0.052±0.00 N/A 0.302±0.00 N/A 0.439±0.00
ENST00000621341 0.240±0.00 0.598±0.00 0.186±0.00 6.784±2.30 0.680±0.39 1.162±0.83 0.910±0.00 0.175±0.15 0.161±0.13 0.087±0.00 0.146±0.11 0.127±0.03 0.045±0.02 0.404±0.28
ENSG00000198523 ENST00000357525 3.372±0.00 15.801±0.00 2.574±0.00 0.973±0.00 8.155±3.91 35.497±14.77 494.520±36.55 2.750±2.54 17.339±17.06 10.127±0.20 57.310±4.37 2.501±2.02 0.521±0.64 7.437±6.64
ENSG00000216809 ENST00000407450 0.014±0.00 0.055±0.00 N/A 0.180±0.12 0.159±0.15 0.123±0.09 0.075±0.00 N/A 0.261±0.00 0.279±0.00 0.387±0.00 0.139±0.14 0.022±0.00 0.155±0.11
ENSG00000217330 ENST00000402595 N/A 0.140±0.00 N/A 0.024±0.00 N/A 0.193±0.00 0.076±0.03 N/A 0.823±0.00 0.160±0.00 0.563±0.00 0.192±0.16 N/A 0.144±0.00
ENSG00000230202 ENST00000443998 0.088±0.00 11.351±0.00 N/A 0.300±0.00 0.214±0.01 0.466±0.13 0.073±0.01 4.480±1.79 0.043±0.00 0.243±0.00 0.250±0.00 14.407±19.57 24.426±32.34 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038583 ENSMUST00000046221 2.559±1.72 0.274±0.07 2.569±0.42 0.090±0.04 0.469±0.18 6.712±1.09 1377.355±313.87 1.543±0.57 0.076±0.06 6.869±0.91 0.582±0.28 2.301±1.08 0.148±0.23 12.802±6.31
ENSMUST00000163319 N/A N/A N/A N/A N/A N/A N/A 0.228±0.00 N/A 0.730±0.00 0.146±0.03 0.767±0.00 N/A N/A
ENSMUSG00000038594 ENSMUST00000095691 1.704±0.53 8.990±0.82 N/A N/A 2.219±1.19 1.343±0.38 0.998±0.65 1.103±0.40 2.150±1.18 1.288±0.21 N/A 4.113±1.88 1.906±0.54 78.070±55.16
ENSMUSG00000038602 ENSMUST00000105473 0.210±0.01 0.444±0.19 0.934±0.03 14.474±5.31 0.259±0.08 0.641±0.20 0.369±0.06 1.061±0.22 0.037±0.03 0.132±0.08 0.182±0.05 0.683±0.25 0.034±0.01 0.053±0.04

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