C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polymerase (DNA directed), delta 1, catalytic subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038644 Pold1 10090 - 7:44532746-44548849 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000049343 Pold1-001 44532746-44548847 protein_coding
  ENSMUST00000123787 Pold1-009 44534069-44535091 retained_intron
  ENSMUST00000131302 Pold1-005 44541497-44542342 retained_intron
  ENSMUST00000132268 Pold1-006 44537519-44538418 retained_intron
  ENSMUST00000136225 Pold1-011 44532754-44534186 retained_intron
  ENSMUST00000138746 Pold1-002 44532751-44548849 retained_intron
  ENSMUST00000141742 Pold1-008 44533896-44535396 retained_intron
  ENSMUST00000142483 Pold1-007 44535016-44535958 retained_intron
  ENSMUST00000145956 Pold1-004 44542102-44548733 protein_coding
  ENSMUST00000147503 Pold1-010 44533280-44534189 retained_intron
  ENSMUST00000151793 Pold1-003 44532786-44548838 nonsense_mediated_decay
  ENSMUST00000154783 Pold1-012 44532749-44533918 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049343ENSMUST00000138746ENSMUST00000151793ENSMUST00000154783
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049343 7.618±2.70 6.647±0.74 6.192±0.74 10.368±6.65 11.930±4.10 11.524±2.25 2.970±0.36 3.389±0.28 11.949±12.29 8.397±0.68 1.452±0.62 18.602±7.11 13.420±8.20 4.475±1.63
ENSMUST00000138746 N/A N/A N/A 0.422±0.00 N/A N/A N/A N/A 0.203±0.00 N/A N/A N/A N/A 0.897±0.00
ENSMUST00000151793 N/A N/A N/A N/A 0.447±0.00 N/A N/A N/A N/A N/A N/A 1.355±0.00 13.084±0.00 N/A
ENSMUST00000154783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.141±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000109 IEA nucleotide-excision repair complex
GO:0000166 IEA nucleotide binding
GO:0000731 IEA DNA synthesis involved in DNA repair
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0003887 IBA DNA-directed DNA polymerase activity
GO:0005515 IEA protein binding
GO:0005634 IBA nucleus
GO:0005737 IEA cytoplasm
GO:0006260 IEA DNA replication
GO:0006287 IMP base-excision repair, gap-filling
GO:0006297 IBA nucleotide-excision repair, DNA gap filling
GO:0007346 IBA regulation of mitotic cell cycle
GO:0008408 IMP 3'-5' exonuclease activity
GO:0016020 IEA membrane
GO:0016235 IEA aggresome
GO:0043137 IBA DNA replication, removal of RNA primer
GO:0043625 IBA delta DNA polymerase complex
GO:0045004 IMP DNA replication proofreading
GO:0046872 IEA metal ion binding
GO:0051539 IEA 4 iron, 4 sulfur cluster binding
GO:0055089 ISS fatty acid homeostasis
GO:0071897 IEA DNA biosynthetic process
GO:0090305 IMP:IEA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027689 pold1 polymerase (DNA directed), delta 1, catalytic subunit protein_coding Danio_rerio
ENSG00000062822 POLD1 polymerase (DNA directed), delta 1, catalytic subunit protein_coding Homo_sapiens

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