C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (DNA directed), delta 1, catalytic subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000049343 Pold1-001 ENSMUSG00000038644 10090 - 7:44532746-44548847 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049343
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049343 7.618±2.70 6.647±0.74 6.192±0.74 10.368±6.65 11.930±4.10 11.524±2.25 2.970±0.36 3.389±0.28 11.949±12.29 8.397±0.68 1.452±0.62 18.602±7.11 13.420±8.20 4.475±1.63

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000109 IEA nucleotide-excision repair complex
GO:0000166 IEA nucleotide binding
GO:0000731 IEA DNA synthesis involved in DNA repair
GO:0003682 IEA chromatin binding
GO:0003887 IBA DNA-directed DNA polymerase activity
GO:0005515 IEA protein binding
GO:0005634 IBA nucleus
GO:0005737 IEA cytoplasm
GO:0006260 IEA DNA replication
GO:0006287 IMP base-excision repair, gap-filling
GO:0006297 IBA nucleotide-excision repair, DNA gap filling
GO:0007346 IBA regulation of mitotic cell cycle
GO:0008408 IMP 3'-5' exonuclease activity
GO:0016020 IEA membrane
GO:0016235 IEA aggresome
GO:0043137 IBA DNA replication, removal of RNA primer
GO:0043625 IBA delta DNA polymerase complex
GO:0045004 IMP DNA replication proofreading
GO:0046872 IEA metal ion binding
GO:0051539 IEA 4 iron, 4 sulfur cluster binding
GO:0055089 ISS fatty acid homeostasis
GO:0090305 IMP:IEA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000440232 POLD1-002 protein_coding Homo_sapiens 0 3395
ENST00000593407 POLD1-008 protein_coding Homo_sapiens 0 902
ENST00000593981 POLD1-011 protein_coding Homo_sapiens 0 819
ENST00000595904 POLD1-004 protein_coding Homo_sapiens 0 1711
ENST00000596221 POLD1-006 retained_intron Homo_sapiens 0 318
ENST00000596648 POLD1-010 retained_intron Homo_sapiens 0 353
ENST00000597963 POLD1-007 retained_intron Homo_sapiens 0 422
ENST00000599632 CTD-2545M3.6-001 protein_coding Homo_sapiens 0 516
ENST00000599857 POLD1-001 protein_coding Homo_sapiens 0 3367
ENST00000600859 POLD1-003 nonsense_mediated_decay Homo_sapiens 0 2680
ENST00000613923 POLD1-201 protein_coding Homo_sapiens 0 1716

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