C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GA repeat binding protein, beta 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000098873 Gabpb2-201 ENSMUSG00000038766 10090 - 3:95181773-95208937 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000098873
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000098873 8.115±2.50 5.570±0.62 4.220±0.01 1.886±0.00 8.944±0.98 7.151±0.78 3.200±0.18 5.629±0.38 6.342±2.76 12.107±1.19 2.011±0.11 9.332±1.46 6.277±1.53 1.189±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 ISO nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0042803 IDA protein homodimerization activity
GO:0044212 ISO transcription regulatory region DNA binding
GO:0045944 ISO positive regulation of transcription from RNA polymerase II promoter
GO:0046982 ISO protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368916 GABPB2-002 protein_coding Homo_sapiens 0 1376
ENST00000368918 GABPB2-001 protein_coding Homo_sapiens 0 760
ENST00000462520 GABPB2-004 processed_transcript Homo_sapiens 0 682
ENST00000467551 GABPB2-003 processed_transcript Homo_sapiens 0 556
ENST00000486076 GABPB2-005 processed_transcript Homo_sapiens 0 619
ENST00000489549 GABPB2-006 processed_transcript Homo_sapiens 0 398

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