C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 117, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000037502 Fam117a-001 ENSMUSG00000038893 10090 + 11:95337018-95381872 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037502
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037502 4.720±0.90 7.671±2.20 8.426±1.00 2.429±0.91 14.130±7.28 5.256±1.46 1.541±0.73 2.599±0.18 35.315±38.49 11.335±5.84 0.587±0.29 8.417±3.33 10.988±7.42 3.478±2.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QJ CIL_0007QJ_0002 VISTA 11:95039208-95641127
CIL_000877 CIL_000877_0002 VISTA 11:95055809-95658196
CIL_0009BV CIL_0009BV_0002 VISTA 11:95055825-95658170

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000240364 FAM117A-001 protein_coding Homo_sapiens 0 1705
ENST00000503573 FAM117A-013 nonsense_mediated_decay Homo_sapiens 0 599
ENST00000503720 FAM117A-007 processed_transcript Homo_sapiens 0 268
ENST00000503855 FAM117A-006 processed_transcript Homo_sapiens 0 483
ENST00000505159 FAM117A-003 processed_transcript Homo_sapiens 0 732
ENST00000506156 FAM117A-009 protein_coding Homo_sapiens 0 556
ENST00000509347 FAM117A-004 processed_transcript Homo_sapiens 0 270
ENST00000511743 FAM117A-012 protein_coding Homo_sapiens 0 647
ENST00000513602 FAM117A-002 protein_coding Homo_sapiens 0 1413
ENST00000514018 FAM117A-005 processed_transcript Homo_sapiens 0 736
ENST00000514841 FAM117A-011 retained_intron Homo_sapiens 0 368
ENST00000515240 FAM117A-010 processed_transcript Homo_sapiens 0 660

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