C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: 5-hydroxytryptamine (serotonin) receptor 5A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039106 Htr5a 10090 + 5:27841947-27855086 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000036227 Htr5a-201 27841947-27855086 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonKidneyLiverOvaryPlacentaTestisENSMUST00000036227
Transcript ID Adrenal Bladder Brain Colon Kidney Liver Ovary Placenta Testis
ENSMUST00000036227 0.022±0.01 0.001±0.00 0.806±0.20 0.013±0.00 0.005±0.00 0.004±0.00 0.134±0.07 0.003±0.00 0.009±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000K5 CIL_0000K5_0003 CGP 5:27740667-27855086
CIL_00026E CIL_00026E_0002 CGP 5:27841947-28078662

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004993 ISO serotonin receptor activity
GO:0005791 IEA rough endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005887 IEA integral component of plasma membrane
GO:0007187 IEA G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger
GO:0007210 IEA serotonin receptor signaling pathway
GO:0007420 IEA brain development
GO:0019933 IDA cAMP-mediated signaling
GO:0021766 IEA hippocampus development
GO:0030425 IEA dendrite
GO:0032355 IEA response to estradiol
GO:0043204 IEA perikaryon

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038869 htr5a 5-hydroxytryptamine (serotonin) receptor 5A protein_coding Danio_rerio
ENSDARG00000068557 htr5al 5-hydroxytryptamine (serotonin) receptor 5A like protein_coding Danio_rerio
ENSG00000157219 HTR5A 5-hydroxytryptamine (serotonin) receptor 5A, G protein-coupled protein_coding Homo_sapiens

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