C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00026E_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000157219-ENSG00000186480 CGP 9606 7:155070324-155310235
GeneTranscriptPositionBiotype
ENSG00000157219 (HTR5A)
5-hydroxytryptamine (serotonin) receptor 5A, G protein-coupled 		ENST00000287907 (HTR5A-001) 155070324-155085749 protein_coding
ENST00000486819 (HTR5A-002) 155077138-155084615 processed_transcript
ENSG00000186480 (INSIG1)
insulin induced gene 1 		ENST00000340368 (INSIG1-001) 155297776-155310235 protein_coding
ENST00000342407 (INSIG1-003) 155297889-155308757 protein_coding
ENST00000344756 (INSIG1-201) 155297776-155310233 protein_coding
ENST00000425172 (INSIG1-002) 155297829-155298655 protein_coding
ENST00000468307 (INSIG1-004) 155301607-155303018 retained_intron
ENST00000476756 (INSIG1-005) 155298561-155308960 protein_coding
ENSG00000217825 (AC099552.4)
 ENST00000404289 (AC099552.4-001) 155196687-155198436 lincRNA
ENST00000431083 (AC099552.4-002) 155196563-155198455 lincRNA
ENSG00000220575 (HTR5AOS)
HTR5A antisense RNA 1 		ENST00000395731 (HTR5AOS-001) 155067067-155071557 antisense
ENST00000493904 (HTR5AOS-002) 155070427-155071557 antisense
ENSG00000225612 (AC099552.2)
 ENST00000418523 (AC099552.2-001) 155267299-155268052 lincRNA
ENSG00000228521 (AC099552.3)
 ENST00000454149 (AC099552.3-001) 155204147-155205189 lincRNA
ENSG00000273117 (AC144652.1)
 ENST00000609974 (AC144652.1-001) 155295918-155297541 lincRNA
ENSG00000274637 (RP11-279O22.1)
 ENST00000622492 (RP11-279O22.1-001) 155106062-155106400 unprocessed_pseudogene
ENSG00000278998 (RP11-1430O6.1)
 ENST00000624248 (RP11-1430O6.1-001) 155222903-155223851 TEC
CIL_00026E_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039106-ENSMUSG00000045294 CGP 10090 5:27841947-28078662
GeneTranscriptPositionBiotype
ENSMUSG00000039106 (Htr5a)
5-hydroxytryptamine (serotonin) receptor 5A 		ENSMUST00000036227 (Htr5a-201) 27841947-27855086 protein_coding
ENSMUSG00000045294 (Insig1)
insulin induced gene 1 		ENSMUST00000059155 (Insig1-001) 28071363-28078662 protein_coding
ENSMUSG00000097673 (Gm26608)
predicted gene, 26608 		ENSMUST00000180740 (Gm26608-201) 28019465-28071105 lincRNA
ENSMUST00000181503 (Gm26608-202) 28053951-28055459 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00026E_0001ENSG00000157219ENST00000287907ENST00000486819ENSG00000186480ENST00000340368ENST00000342407ENST00000344756ENST00000425172ENST00000468307ENST00000476756ENSG00000217825ENST00000404289ENST00000431083ENSG00000220575ENST00000395731ENST00000493904ENSG00000225612ENST00000418523ENSG00000228521ENST00000454149ENSG00000273117ENST00000609974ENSG00000274637ENST00000622492ENSG00000278998ENST00000624248CIL_00026E_0002ENSMUSG00000039106ENSMUST00000036227ENSMUSG00000045294ENSMUST00000059155ENSMUSG00000097673ENSMUST00000180740ENSMUST00000181503
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00026E_0001ENSG00000157219ENST00000287907ENSG00000186480ENST00000340368ENST00000342407ENST00000344756ENST00000476756ENSG00000217825ENST00000404289ENSG00000220575ENST00000395731ENSG00000225612ENST00000418523ENSG00000228521ENST00000454149ENSG00000273117ENST00000609974ENSG00000274637ENST00000622492ENSG00000278998ENST00000624248CIL_00026E_0002ENSMUSG00000039106ENSMUST00000036227ENSMUSG00000045294ENSMUST00000059155ENSMUSG00000097673ENSMUST00000180740ENSMUST00000181503
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000157219 ENST00000287907 N/A N/A N/A 4.739±0.92 N/A 0.028±0.00 N/A N/A N/A N/A N/A N/A N/A 0.239±0.00
ENST00000486819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000186480 ENST00000340368 17.083±0.00 13.680±0.00 2.056±0.00 21.028±11.90 21.634±16.67 5.896±2.27 2.593±1.34 32.270±23.64 25.720±19.47 30.928±25.87 1.678±0.72 16.497±15.71 13.623±4.95 15.580±9.23
ENST00000342407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.915±0.00 7.607±0.00 6.601±0.00
ENST00000344756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.001±0.00 N/A N/A
ENST00000425172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.583±0.00 10.965±0.00 15.442±0.00 12.259±0.00
ENSG00000217825 ENST00000404289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.092±0.00 N/A
ENST00000431083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000220575 ENST00000395731 N/A 0.026±0.00 N/A 3.161±0.32 0.012±0.00 0.015±0.00 0.008±0.00 N/A N/A N/A 0.004±0.00 0.007±0.00 N/A N/A
ENST00000493904 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225612 ENST00000418523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.580±0.56
ENSG00000228521 ENST00000454149 N/A N/A N/A N/A N/A N/A N/A 0.135±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000273117 ENST00000609974 0.737±0.00 0.906±0.00 N/A 2.215±1.61 0.466±0.20 0.493±0.00 0.139±0.04 0.772±0.56 0.567±0.52 1.175±0.58 0.078±0.00 1.108±0.83 0.851±0.17 2.154±0.83
ENSG00000274637 ENST00000622492 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.00
ENSG00000278998 ENST00000624248 N/A N/A N/A 0.062±0.00 N/A N/A N/A N/A N/A N/A N/A 0.038±0.01 0.157±0.16 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039106 ENSMUST00000036227 N/A 0.022±0.01 0.001±0.00 0.806±0.20 N/A 0.013±0.00 N/A 0.005±0.00 0.004±0.00 N/A N/A 0.134±0.07 0.003±0.00 0.009±0.00
ENSMUSG00000045294 ENSMUST00000059155 170.147±68.18 375.252±17.90 20.063±4.59 20.098±7.20 195.178±86.67 60.444±16.08 8.955±0.84 32.102±4.33 155.308±107.23 56.134±15.56 3.999±0.63 58.505±27.00 20.351±17.32 6.733±2.73
ENSMUSG00000097673 ENSMUST00000180740 0.033±0.00 0.057±0.04 N/A 0.056±0.00 0.026±0.00 0.056±0.00 0.020±0.01 0.028±0.01 0.017±0.01 0.017±0.00 0.029±0.00 0.060±0.01 N/A 0.252±0.01
ENSMUST00000181503 0.139±0.10 0.080±0.00 N/A 0.042±0.02 0.121±0.07 0.104±0.00 0.054±0.03 0.093±0.04 1.378±1.00 0.081±0.00 N/A 0.121±0.07 0.029±0.01 0.371±0.00

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