C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein-O-mannosyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036473 Pomt1-001 ENSMUSG00000039254 10090 + 2:32236590-32255005 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036473
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036473 17.736±0.97 23.300±1.34 5.292±0.41 8.682±2.75 15.879±3.75 11.359±2.33 5.709±0.81 12.959±1.25 8.228±2.11 7.590±0.30 3.737±0.23 25.186±6.19 7.662±1.48 77.798±22.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088E CIL_00088E_0002 VISTA 2:31827730-32428586
CIL_0006ID CIL_0006ID_0002 CGP 2:32151082-32255005
CIL_0006IF CIL_0006IF_0002 CGP 2:32236590-32260159

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000030 IEA mannosyltransferase activity
GO:0001669 IDA acrosomal vesicle
GO:0004169 IEA dolichyl-phosphate-mannose-protein mannosyltransferase activity
GO:0005789 ISS endoplasmic reticulum membrane
GO:0006493 IEA protein O-linked glycosylation
GO:0016021 IEA integral component of membrane
GO:0016529 IDA sarcoplasmic reticulum
GO:0030198 IMP extracellular matrix organization
GO:0035269 IEA protein O-linked mannosylation
GO:0046872 IEA metal ion binding
GO:0097502 IEA mannosylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341012 POMT1-002 protein_coding Homo_sapiens 0 1927
ENST00000372220 POMT1-012 protein_coding Homo_sapiens 0 776
ENST00000372228 POMT1-001 protein_coding Homo_sapiens 0 1411
ENST00000402686 POMT1-003 protein_coding Homo_sapiens 0 2039
ENST00000404875 POMT1-201 protein_coding Homo_sapiens 0 1805
ENST00000415075 POMT1-007 protein_coding Homo_sapiens 0 327
ENST00000423007 POMT1-202 protein_coding Homo_sapiens 0 2023
ENST00000430619 POMT1-008 protein_coding Homo_sapiens 0 566
ENST00000441334 POMT1-005 protein_coding Homo_sapiens 0 503
ENST00000462375 POMT1-011 processed_transcript Homo_sapiens 0 479
ENST00000467848 POMT1-013 processed_transcript Homo_sapiens 0 363
ENST00000485278 POMT1-004 processed_transcript Homo_sapiens 0 1086

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