C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cytokine-dependent hematopoietic cell linker
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039315 Clnk 10090 - 5:38706462-38876812 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000169819 Clnk-201 38706462-38876693 protein_coding
  ENSMUST00000171633 Clnk-202 38706462-38876812 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000169819ENSMUST00000171633
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000169819 0.141±0.07 0.156±0.00 N/A 0.055±0.03 0.101±0.04 0.108±0.02 0.056±0.02 0.384±0.09 0.059±0.03 0.069±0.03 0.023±0.00 0.138±0.04 0.059±0.02 0.690±0.28
ENSMUST00000171633 N/A N/A 0.071±0.00 N/A 0.127±0.08 N/A N/A 0.068±0.00 0.036±0.00 0.134±0.05 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UW CIL_0008UW_0002 VISTA 5:38299839-38905514
CIL_0001XH CIL_0001XH_0002 CGP 5:38668484-38876812
CIL_0001XI CIL_0001XI_0002 CGP 5:38706462-39755475

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0007169 IDA transmembrane receptor protein tyrosine kinase signaling pathway
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091321 CLNK cytokine-dependent hematopoietic cell linker protein_coding Danio_rerio
ENSG00000109684 CLNK cytokine-dependent hematopoietic cell linker protein_coding Homo_sapiens

Loading