C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001XI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000109684-ENSG00000002587 CGP 9606 4:10486395-11429765
GeneTranscriptPositionBiotype
ENSG00000002587 (HS3ST1)
heparan sulfate (glucosamine) 3-O-sulfotransferase 1 		ENST00000002596 (HS3ST1-001) 11393150-11429765 protein_coding
ENST00000510712 (HS3ST1-002) 11399758-11429564 protein_coding
ENST00000514690 (HS3ST1-003) 11399758-11428597 protein_coding
ENSG00000109684 (CLNK)
cytokine-dependent hematopoietic cell linker 		ENST00000226951 (CLNK-001) 10486395-10684865 protein_coding
ENST00000442825 (CLNK-201) 10490215-10598681 protein_coding
ENST00000507719 (CLNK-002) 10531413-10656561 protein_coding
ENST00000515667 (CLNK-003) 10486874-10517465 protein_coding
ENSG00000207716 (MIR572)
microRNA 572 		ENST00000384983 (MIR572-201) 11368827-11368921 miRNA
ENSG00000222182 (RNA5SP156)
RNA, 5S ribosomal pseudogene 156 		ENST00000410250 (RNA5SP156-201) 11414051-11414160 rRNA
ENSG00000249334 (RP11-61G19.1)
 ENST00000505494 (RP11-61G19.1-001) 10685003-10697661 lincRNA
ENSG00000250896 (RNPS1P1)
RNA binding protein S1, serine-rich domain pseudogene 1 		ENST00000507437 (RNPS1P1-001) 11371975-11372892 processed_pseudogene
CIL_0001XI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039315-ENSMUSG00000051022 CGP 10090 5:38706462-39755475
GeneTranscriptPositionBiotype
ENSMUSG00000039315 (Clnk)
cytokine-dependent hematopoietic cell linker 		ENSMUST00000169819 (Clnk-201) 38706462-38876693 protein_coding
ENSMUST00000171633 (Clnk-202) 38706462-38876812 protein_coding
ENSMUSG00000051022 (Hs3st1)
heparan sulfate (glucosamine) 3-O-sulfotransferase 1 		ENSMUST00000053116 (Hs3st1-002) 39613939-39644634 protein_coding
ENSMUST00000117944 (Hs3st1-001) 39613935-39755475 protein_coding
ENSMUST00000137142 (Hs3st1-003) 39614769-39645246 protein_coding
ENSMUST00000152057 (Hs3st1-004) 39615074-39644597 protein_coding
ENSMUSG00000079528 (Clnkos)
cytokine-dependent hematopoietic cell linker, opposite strand 		ENSMUST00000114080 (Clnkos-201) 38735983-38747897 antisense
ENSMUST00000177682 (Clnkos-001) 38735984-38747897 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001XI_0001ENSG00000002587ENST00000002596ENST00000510712ENST00000514690ENSG00000109684ENST00000226951ENST00000442825ENST00000507719ENST00000515667ENSG00000207716ENST00000384983ENSG00000222182ENST00000410250ENSG00000249334ENST00000505494ENSG00000250896ENST00000507437CIL_0001XI_0002ENSMUSG00000039315ENSMUST00000169819ENSMUST00000171633ENSMUSG00000051022ENSMUST00000053116ENSMUST00000117944ENSMUST00000137142ENSMUST00000152057ENSMUSG00000079528ENSMUST00000114080ENSMUST00000177682
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001XI_0001ENSG00000002587ENST00000002596ENST00000510712ENSG00000109684ENST00000226951ENST00000442825ENST00000507719ENST00000515667ENSG00000207716ENST00000384983ENSG00000222182ENST00000410250ENSG00000249334ENST00000505494ENSG00000250896ENST00000507437CIL_0001XI_0002ENSMUSG00000039315ENSMUST00000169819ENSMUST00000171633ENSMUSG00000051022ENSMUST00000053116ENSMUST00000117944ENSMUST00000137142ENSMUSG00000079528ENSMUST00000114080ENSMUST00000177682
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000002587 ENST00000002596 0.069±0.00 0.953±0.00 0.036±0.00 0.279±0.00 0.139±0.00 0.082±0.00 0.168±0.00 0.480±0.39 0.040±0.00 0.682±0.00 0.060±0.00 3.632±2.65 0.264±0.02 0.958±0.00
ENST00000510712 0.802±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.561±0.00 N/A
ENST00000514690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000109684 ENST00000226951 N/A 0.279±0.00 N/A N/A 0.007±0.00 0.041±0.00 N/A 1.176±0.00 0.006±0.00 0.039±0.01 N/A 0.049±0.04 0.010±0.00 N/A
ENST00000442825 N/A N/A N/A N/A N/A N/A N/A 0.253±0.00 N/A 0.126±0.00 N/A N/A 0.186±0.04 N/A
ENST00000507719 0.080±0.00 N/A N/A 0.076±0.00 0.264±0.19 0.094±0.00 0.039±0.00 N/A 0.115±0.06 0.484±0.00 0.037±0.00 0.075±0.00 0.364±0.00 0.338±0.00
ENST00000515667 0.037±0.00 N/A N/A 0.012±0.00 0.014±0.00 0.006±0.00 0.002±0.00 0.015±0.00 0.008±0.00 N/A N/A 0.028±0.03 N/A N/A
ENSG00000207716 ENST00000384983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.654±0.00
ENSG00000222182 ENST00000410250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.846±0.00 N/A N/A
ENSG00000249334 ENST00000505494 N/A 0.086±0.00 N/A N/A N/A N/A N/A N/A 0.019±0.00 N/A N/A 0.053±0.00 0.079±0.00 N/A
ENSG00000250896 ENST00000507437 N/A 0.025±0.00 N/A 0.074±0.02 0.053±0.00 0.096±0.00 0.023±0.00 0.264±0.00 N/A 0.077±0.00 0.311±0.00 0.054±0.00 N/A 0.150±0.08
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039315 ENSMUST00000169819 0.141±0.07 0.156±0.00 N/A 0.055±0.03 0.101±0.04 0.108±0.02 0.056±0.02 0.384±0.09 0.059±0.03 0.069±0.03 0.023±0.00 0.138±0.04 0.059±0.02 0.690±0.28
ENSMUST00000171633 N/A N/A 0.071±0.00 N/A 0.127±0.08 N/A N/A 0.068±0.00 0.036±0.00 0.134±0.05 N/A N/A N/A N/A
ENSMUSG00000051022 ENSMUST00000053116 3.541±0.73 7.314±0.43 9.741±1.22 7.434±3.04 3.949±1.17 7.824±0.99 1.179±0.41 1.473±0.56 0.161±0.05 16.614±3.71 0.518±0.13 28.709±6.94 15.791±8.49 0.316±0.15
ENSMUST00000117944 N/A N/A N/A N/A N/A N/A 2.642±1.01 N/A 0.146±0.12 N/A N/A N/A N/A 0.107±0.08
ENSMUST00000137142 1.341±0.00 N/A N/A 5.521±1.82 1.053±0.00 N/A N/A N/A 0.127±0.06 N/A N/A N/A N/A 0.210±0.00
ENSMUST00000152057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000079528 ENSMUST00000114080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.681±0.04
ENSMUST00000177682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.674±0.04

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