C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: secreted and transmembrane 1B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039364 Sectm1b 10090 - 11:121053458-121063569 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000039309 Sectm1b-001 121053458-121063569 protein_coding
  ENSMUST00000081499 Sectm1b-002 121054582-121063545 protein_coding
  ENSMUST00000130786 Sectm1b-003 121054957-121063455 protein_coding
  ENSMUST00000132117 Sectm1b-005 121055412-121063303 retained_intron
  ENSMUST00000150577 Sectm1b-004 121056234-121056628 processed_transcript
  ENSMUST00000168459 Sectm1b-201 121054531-121063538 protein_coding
  ENSMUST00000170381 Sectm1b-202 121054536-121056363 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039309ENSMUST00000130786ENSMUST00000132117ENSMUST00000168459ENSMUST00000170381
Transcript ID Adipose Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039309 0.749±0.01 0.004±0.00 0.173±0.05 65.624±9.30 16.948±1.15 0.044±0.03 0.120±0.07 0.037±0.00 1.108±0.52 0.140±0.05 0.078±0.07
ENSMUST00000130786 N/A N/A 0.058±0.00 N/A N/A 0.021±0.00 N/A N/A N/A N/A N/A
ENSMUST00000132117 N/A 0.006±0.00 0.174±0.00 N/A N/A N/A N/A N/A N/A N/A 0.051±0.00
ENSMUST00000168459 N/A N/A N/A N/A N/A 0.020±0.01 N/A N/A 1.968±1.07 0.205±0.00 0.115±0.00
ENSMUST00000170381 0.649±0.07 N/A 0.177±0.12 45.453±9.39 14.905±2.06 0.070±0.04 0.284±0.22 0.010±0.00 0.893±0.31 0.180±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00054O CIL_00054O_0002 CGP 11:121036747-121063569

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005887 ISS integral component of plasma membrane
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000141574 SECTM1 secreted and transmembrane 1 protein_coding Homo_sapiens

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