C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collagen, type X, alpha 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039462 Col10a1 10090 + 10:34389981-34397085 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000105511 Col10a1-001 34389981-34397085 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLungENSMUST00000105511
Transcript ID Brain Heart Lung
ENSMUST00000105511 0.124±0.04 0.484±0.08 0.700±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001958 IEA endochondral ossification
GO:0005578 IDA proteinaceous extracellular matrix
GO:0005581 IDA collagen trimer
GO:0005938 IDA cell cortex
GO:0051216 IEA cartilage development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054753 col10a1 collagen, type X, alpha 1 protein_coding Danio_rerio
ENSG00000123500 COL10A1 collagen, type X, alpha 1 protein_coding Homo_sapiens

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